PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022721458.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family HD-ZIP
Protein Properties Length: 838aa    MW: 92219.8 Da    PI: 6.5048
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022721458.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox57.72e-181775357
                    --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
        Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                    k  ++t+eq+e+Le+l++ +++ps  +r++L +++    +++ +q+kvWFqNrR +ek+
  XP_022721458.1 17 KYVRYTPEQVEALERLYHDCPKPSSIRRQQLIRECpilsNIEPKQIKVWFQNRRCREKQ 75
                    5679*****************************************************97 PP
2START177.67.5e-561613692205
                     HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEEEE CS
           START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galqlm 94 
                     +aee+++e+++ka+ ++  Wv+++ +++g++++ +++ s++++g a+ra+g+v  +++  v+ell+d++ W ++++++++l+v+ ++  g+++l 
  XP_022721458.1 161 IAEETLAEFLSKATGTAVEWVQMPGMKPGPDSIGIIAISHGCPGVAARACGLVGLEPT-RVAELLKDRPSWFRDCRAVDVLNVLPTAngGTIELL 254
                     7899******************************************************.9*************************9999****** PP

                     EEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHH CS
           START  95 vaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrslv 185
                     +++l+a+++l++ Rdf+ +Ry+  l++g++v++++S+ ++q+ p+    +++vRae+lpSg+li+p+++g+s +++v+h+dl+ ++++++lr+l+
  XP_022721458.1 255 YMQLYAPTTLAAaRDFWLLRYTSVLEDGSLVVCERSLKNTQNGPSmpaVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLY 349
                     ********************************************999999********************************************* PP

                     HHHHHHHHHHHHHHTXXXXX CS
           START 186 ksglaegaktwvatlqrqce 205
                     +s+++ ++kt++a+l+++++
  XP_022721458.1 350 ESSTVLAQKTTMAALRQLRQ 369
                     ****************9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 838 aa     Download sequence    
MAMSCKDGKL GSLDNGKYVR YTPEQVEALE RLYHDCPKPS SIRRQQLIRE CPILSNIEPK  60
QIKVWFQNRR CREKQRKEAS RLQAVNRKLT AMNKLLMEEN DRLQKQVSQL VYENGYFRQH  120
TRNVTLATKD PSCESVVTSG QHHVTPQHPP RDASPAGLLS IAEETLAEFL SKATGTAVEW  180
VQMPGMKPGP DSIGIIAISH GCPGVAARAC GLVGLEPTRV AELLKDRPSW FRDCRAVDVL  240
NVLPTANGGT IELLYMQLYA PTTLAAARDF WLLRYTSVLE DGSLVVCERS LKNTQNGPSM  300
PAVQHFVRAE MLPSGYLIRP CEGGGSIIHI VDHMDLEPWS VPEVLRPLYE SSTVLAQKTT  360
MAALRQLRQI AQEVSQSSVT GWGRRPAALR ALSQRLSRGF NEAVNGFTDE GWSMMGNDGV  420
DDVTILVNSS PDKLMGLNLS FANGFPSVIS AVLCAKASML LQNVPPAILL RFLREHRSEW  480
ADSSIDAYSA AAIKVGPCSL PGSRVGGFAG QVILPLAHTV EHEEFLEVIK LEGMVHSPED  540
AIMPRDVFLL QLCSGMDENA VGTCAELIFA PIDASFADDA PLLPSGFRII PLDSGKEVSS  600
PNRTLDLASA LEIGPAGNKS SNDYSSNSGC MRSVMTIAFE FAFENHMQEH VASMARQYVR  660
SIISSVQRVA LALSPSNLSS HAGLRSPLGT PEAQTLARWI CQSYRLYMGV ELLKSSSEGS  720
ESILKTLWHH SDAIMCCSLK ALPVFTFSNQ AGLDMLETTL VALQDITLEK IFDDHGRKTL  780
CTEFPQIMQQ GFACLQGGIC LSSMGRPVSY ERAVAWKVLN EEENAHCICF MFINWSFV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G52150.10.0HD-ZIP family protein