PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022721436.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family HD-ZIP
Protein Properties Length: 641aa    MW: 71435.5 Da    PI: 6.936
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022721436.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox50.34e-162401856
                    HHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox 18 lFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                    lF+++++p++++r++L+k+lgL  rqVk+WFqNrR++ k
  XP_022721436.1  2 LFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIK 40
                    7**********************************9877 PP
2START234.43.1e-731563792206
                     HHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS.......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEE CS
           START   2 laeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv......dsgealrasgvvdmvlallveellddkeqWdetla....kaetl 82 
                     + ++a++e  ++a+a+ep+Wv+s+    e++n+de++++f+ + +      +s+ea+r++gvv+ +l++lv++++d++ qW+e+++    ka+t+
  XP_022721436.1 156 IVNQAMEEMKQMATAGEPLWVRSVetgrEILNYDEYVKEFSVESSsngrpkRSIEASRETGVVFVDLPRLVQSFMDVN-QWKEMFPciisKAATV 249
                     567899**********************************77666899******************************.**************** PP

                     EEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-E CS
           START  83 evissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehv 170
                     +vi++g      ga+ lm+aelq+l+plvp R+++fvRy++ql+a++w+ivdvS+d+ +++  ++s+v+++++pSg++ie+ksngh+kvtwveh 
  XP_022721436.1 250 DVICNGeapnknGAVLLMFAELQMLTPLVPtREVYFVRYCKQLSAEQWAIVDVSIDNVEENI-DASLVKCRKRPSGCIIEDKSNGHCKVTWVEHL 343
                     ************************************************************98.9******************************* PP

                     E--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
           START 171 dlkgrlphwllrslvksglaegaktwvatlqrqcek 206
                     +++++++h l+r +v+sgla+ga++w+atlq qce+
  XP_022721436.1 344 ECQKSTVHTLYRTVVNSGLAFGARHWMATLQLQCER 379
                     **********************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 641 aa     Download sequence    
MLFKESPHPD EKQRQQLSKQ LGLAPRQVKF WFQNRRTQIK AIQERHENSL FKQELEKLRD  60
ENKAMRETIN KACCPNCGMA TTSKDGSMTT EEQQLRIENA KLKAEVEKLR TVIGKYPPGA  120
ASTSSCSAGN DDQENRSSLD FYTGIFGLEK SRIMEIVNQA MEEMKQMATA GEPLWVRSVE  180
TGREILNYDE YVKEFSVESS SNGRPKRSIE ASRETGVVFV DLPRLVQSFM DVNQWKEMFP  240
CIISKAATVD VICNGEAPNK NGAVLLMFAE LQMLTPLVPT REVYFVRYCK QLSAEQWAIV  300
DVSIDNVEEN IDASLVKCRK RPSGCIIEDK SNGHCKVTWV EHLECQKSTV HTLYRTVVNS  360
GLAFGARHWM ATLQLQCERF VFFMATNVPT KDSTGVATLA GRKSILKLAQ RMTFSFCHSI  420
GASSYHTWNK VTSKTGEDIR VSSRKNLSDP GEPLGVIVCA VSSVWLPVSP NLLFDFLRDE  480
ARRNEWDIIS NGGPVQSVAN LAKGQDRGNA VTIQTMKSKE NSMWVLQDSC TNAFESMVVF  540
APVDITGMQS VITGCDSSSM AILPSGFSIL PDGLESRPLV ITSRHEKSND TEGGSLLTIA  600
FQILTNSSPT AKLTMESVES VNTIISCTLR NIKTSLQCED G
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G79840.10.0HD-ZIP family protein