PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022721121.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 482aa MW: 52600.9 Da PI: 5.5343

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022721121.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	24.7	4.2e-08	376	416	9	54
HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 r+RR+r+ +++ L++l+P K++ a++L +A +YIk L XP_022721121.1 376 ARQRRERVSERIRVLQRLVPGG-----SKMDTASMLDEAANYIKFL 416 69****************95.....5**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 482 aa Download sequence
MDGLGWDGSE VIANSLPVWN SQRNDIEDSV LMSNLNSSTY GGEMDLPEDI FNQIQELQKA 60 QLFRVNPDSD IVREMVPQPV SELDSVNVAS NVNMLQRQGI RLAADTSLPK STNWRDAITQ 120 ELCSSPLIGR AYGLSTSNAS ISDIGMAVQS QATNGLRNDK AGATTTGSLE SLDCLLSATS 180 SNIDTSVEED GISMIFSDCK NLWNFAASSA VSSGASENNG SNTGSIDFTC PVNELDEAVS 240 QSSSDQYITN GKQSQTKPSS SNKSELKVGL NCGYFSLLQT EPSATEGGFR FIPENPPKAK 300 KARSEKRPCS SNINFQQPSS SVSSSIEEPD PKAIAQMKEM IYRAAAFRPV NLGLEVVEKP 360 KRKNVRISTD PQTVAARQRR ERVSERIRVL QRLVPGGSKM DTASMLDEAA NYIKFLSSQV 420 KALENLGHKR DPINCPPTNL AFSSLPFNHS LDLPMQTHNF PLLNPNHIHH APTKLKKLFQ 480 NL

Sequence ? help Back to Top

Protein Sequence Length: 482 aa Download sequence

MDGLGWDGSE VIANSLPVWN SQRNDIEDSV LMSNLNSSTY GGEMDLPEDI FNQIQELQKA  60
QLFRVNPDSD IVREMVPQPV SELDSVNVAS NVNMLQRQGI RLAADTSLPK STNWRDAITQ  120
ELCSSPLIGR AYGLSTSNAS ISDIGMAVQS QATNGLRNDK AGATTTGSLE SLDCLLSATS  180
SNIDTSVEED GISMIFSDCK NLWNFAASSA VSSGASENNG SNTGSIDFTC PVNELDEAVS  240
QSSSDQYITN GKQSQTKPSS SNKSELKVGL NCGYFSLLQT EPSATEGGFR FIPENPPKAK  300
KARSEKRPCS SNINFQQPSS SVSSSIEEPD PKAIAQMKEM IYRAAAFRPV NLGLEVVEKP  360
KRKNVRISTD PQTVAARQRR ERVSERIRVL QRLVPGGSKM DTASMLDEAA NYIKFLSSQV  420
KALENLGHKR DPINCPPTNL AFSSLPFNHS LDLPMQTHNF PLLNPNHIHH APTKLKKLFQ  480
NL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	377	382	RQRRER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21330.1	3e-59	bHLH family protein