PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022720446.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

HB-other

Protein Properties

Length: 1739aa MW: 196510 Da PI: 5.2448

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022720446.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	58.9	8.4e-19	29	84	2	57
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 kR+ t++qle+Le++++ + yps+++r+ L++klgL++rq ++WF+ rR kekk XP_022720446.1 29 PKRQMKTPYQLEVLEKAYALETYPSEATRAGLSEKLGLSDRQLQMWFCHRRLKEKK 84 69*****************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 1739 aa Download sequence
MESGSEEENN QIKNQNKNVN SSNEGNVKPK RQMKTPYQLE VLEKAYALET YPSEATRAGL 60 SEKLGLSDRQ LQMWFCHRRL KEKKETRLKK PRKGAAPPPE SPIDELRAGP ELDYGSGSGS 120 GSSPYMDSRK LGGSSSRGTM EDAPMVSRYY ESQQSIMELR AIACVEAQLG EPLRDDGPML 180 GMEFDPLPPD AFGAIPEPHK RSGHPYESKL YERHDGQSSK VAARAFHEYQ FLPEHSSLRS 240 DAYGQVTQSH FHESPVDGAR ARATSIVHGE EPLSRVHGSR VCLLPQQDKT GIILSSYQVA 300 DDSLAERESF TNGRINAQSI SHPVLGSEDS YMLSAGQTLN NDADLRNDKK RKSDETIIAR 360 EVEAHENRVR KELEKLDNKR RKSEEKMRKE MERHERERRK EEERLMREKQ REEERSQREL 420 RREMERREKF LQKEYLKAEK KRQKEELRRE KEEERRRVAR EKATARKIAK ESMDLIEDEQ 480 LELMELAAAS KGIPSIIHLD HDSLQNLESF RDSLSLFPSK SVQLKRPFAI QPWIDSEENV 540 GNLLMAWRFL ITFADVLRLW PFTLDEFVQA FHDYDSRLLG EIHVALLKSI IKDIEDVART 600 PVTGVGMNQY CAANPEGGHP QIVEGAYSWG FDIRNWQHHL NPLTWPEIFR QLAISAGFGP 660 QLKKQSAART YMGDNNEGKG CEDVVSTLRS GLAAENAFAL MREKGLLFPR RSRHRLTPGT 720 VKFAAFHVLS LEGSKGLTVL ELADKIQKSG LRDLTTSKTP EASISVALTR DAKLFERIAP 780 STYCLRPAYR KDPADAESIL AEARKKIRQF ENGFLGGEDA DEVERDEVER DEDSECDVDE 840 DPEVDDIATL SNANKDAEYH KNEVNTCSAS EKVHATEDAL NVPSVFDKDF PSFPSNTVKD 900 ANGPINTRTF VAGEKIGTGN PDQKNIEIDE SKSGESWIQG LSEGEYSHLS VEERLNALVA 960 LIGIVNEGNS IRAVLEDRLE AANALKKQMW AEAQLDKSRL KEETIFKMDF PSVMGIKAES 1020 QLPNSAIEGS QSPFPAADNK NDEASPSMPE DQKPLLCSQN VQNDLNSYPA ERALVLQEAS 1080 MVPDNFCTQQ HGYTSKRSRS QLKSYIAHRA EEMYVYRSLP LGQDRRRNRY WQFVASASKN 1140 DPCSGWIFVE LHDRNWRLID SEEAFDTLLS SLDARGIRES HLGIMLQKIE TSFKENVRRN 1200 LQCARAMGRS GSSSENEAYE IDSSPDLPAS FDSPSSAICG LNSDASEILP SFKIQLGRNE 1260 NEKKSALKRY QDFQRWMWKE CYNSSTLCAM KYGKKRCVQL LAVCDVCLAS HIPDEMHCGY 1320 CHQTFSSINN SFNFSEHEIQ CKENKKLDTK ATYILDSSLP QGINLLKSLC AIVEVSVPPE 1380 ALESIWTEGH QKIWSRKLNA SSSADELLKI LTHLESAIKR DHLSSNFETT NELLGSILLS 1440 ERDSTDSVLP WIPQTTAAVA LRLLELDASL MYVKREKAEP YENKEARAYI KLPSRTSLFI 1500 KNKELDLKEL DQDEPMKEEN FANLSNSRRN NYKRGKGGRE QGSGRKWQRI ASGSKYHTGK 1560 RSAIQNNNLS LHLKQQGQRA NGQSSGRGRR TVRKRAERRA ADNTTMTCMA DFVKPEASVV 1620 SARNLDEEWR TGKFSTMQMV NPPDSNSAEE ESDDNAQGEE YEQGNWELDF NGATNGWNAE 1680 PIEASDEGDE AYEDENVIDQ LGEEDSDGDL EMSDASDEVA DKTRNNDGSD SAVSEDYSD

Sequence ? help Back to Top

Protein Sequence Length: 1739 aa Download sequence

MESGSEEENN QIKNQNKNVN SSNEGNVKPK RQMKTPYQLE VLEKAYALET YPSEATRAGL  60
SEKLGLSDRQ LQMWFCHRRL KEKKETRLKK PRKGAAPPPE SPIDELRAGP ELDYGSGSGS  120
GSSPYMDSRK LGGSSSRGTM EDAPMVSRYY ESQQSIMELR AIACVEAQLG EPLRDDGPML  180
GMEFDPLPPD AFGAIPEPHK RSGHPYESKL YERHDGQSSK VAARAFHEYQ FLPEHSSLRS  240
DAYGQVTQSH FHESPVDGAR ARATSIVHGE EPLSRVHGSR VCLLPQQDKT GIILSSYQVA  300
DDSLAERESF TNGRINAQSI SHPVLGSEDS YMLSAGQTLN NDADLRNDKK RKSDETIIAR  360
EVEAHENRVR KELEKLDNKR RKSEEKMRKE MERHERERRK EEERLMREKQ REEERSQREL  420
RREMERREKF LQKEYLKAEK KRQKEELRRE KEEERRRVAR EKATARKIAK ESMDLIEDEQ  480
LELMELAAAS KGIPSIIHLD HDSLQNLESF RDSLSLFPSK SVQLKRPFAI QPWIDSEENV  540
GNLLMAWRFL ITFADVLRLW PFTLDEFVQA FHDYDSRLLG EIHVALLKSI IKDIEDVART  600
PVTGVGMNQY CAANPEGGHP QIVEGAYSWG FDIRNWQHHL NPLTWPEIFR QLAISAGFGP  660
QLKKQSAART YMGDNNEGKG CEDVVSTLRS GLAAENAFAL MREKGLLFPR RSRHRLTPGT  720
VKFAAFHVLS LEGSKGLTVL ELADKIQKSG LRDLTTSKTP EASISVALTR DAKLFERIAP  780
STYCLRPAYR KDPADAESIL AEARKKIRQF ENGFLGGEDA DEVERDEVER DEDSECDVDE  840
DPEVDDIATL SNANKDAEYH KNEVNTCSAS EKVHATEDAL NVPSVFDKDF PSFPSNTVKD  900
ANGPINTRTF VAGEKIGTGN PDQKNIEIDE SKSGESWIQG LSEGEYSHLS VEERLNALVA  960
LIGIVNEGNS IRAVLEDRLE AANALKKQMW AEAQLDKSRL KEETIFKMDF PSVMGIKAES  1020
QLPNSAIEGS QSPFPAADNK NDEASPSMPE DQKPLLCSQN VQNDLNSYPA ERALVLQEAS  1080
MVPDNFCTQQ HGYTSKRSRS QLKSYIAHRA EEMYVYRSLP LGQDRRRNRY WQFVASASKN  1140
DPCSGWIFVE LHDRNWRLID SEEAFDTLLS SLDARGIRES HLGIMLQKIE TSFKENVRRN  1200
LQCARAMGRS GSSSENEAYE IDSSPDLPAS FDSPSSAICG LNSDASEILP SFKIQLGRNE  1260
NEKKSALKRY QDFQRWMWKE CYNSSTLCAM KYGKKRCVQL LAVCDVCLAS HIPDEMHCGY  1320
CHQTFSSINN SFNFSEHEIQ CKENKKLDTK ATYILDSSLP QGINLLKSLC AIVEVSVPPE  1380
ALESIWTEGH QKIWSRKLNA SSSADELLKI LTHLESAIKR DHLSSNFETT NELLGSILLS  1440
ERDSTDSVLP WIPQTTAAVA LRLLELDASL MYVKREKAEP YENKEARAYI KLPSRTSLFI  1500
KNKELDLKEL DQDEPMKEEN FANLSNSRRN NYKRGKGGRE QGSGRKWQRI ASGSKYHTGK  1560
RSAIQNNNLS LHLKQQGQRA NGQSSGRGRR TVRKRAERRA ADNTTMTCMA DFVKPEASVV  1620
SARNLDEEWR TGKFSTMQMV NPPDSNSAEE ESDDNAQGEE YEQGNWELDF NGATNGWNAE  1680
PIEASDEGDE AYEDENVIDQ LGEEDSDGDL EMSDASDEVA DKTRNNDGSD SAVSEDYSD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	78	85	RRLKEKKE
2	349	375	KKRKSDETIIAREVEAHENRVRKELEK
3	379	400	KRRKSEEKMRKEMERHERERRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28420.1	0.0	HB-other family protein