PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022720071.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

G2-like

Protein Properties

Length: 434aa MW: 48361.3 Da PI: 7.2776

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022720071.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	107	1e-33	60	114	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprl+Wtp+LHerF+eav+qLGG++kAtPkt+++lm+++gLtl+h+kSHLQkYRl XP_022720071.1 60 KPRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRL 114 79****************************************************8 PP
2	Myb_DNA-binding	65.7	8.3e-21	62	113	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r++WT++++e++++av+qlGg t+kt+++ mg g+tl+++ks++qky+ XP_022720071.1 62 RLKWTPDLHERFIEAVNQLGGAdkaTPKTVMKLMGiPGLTLYHLKSHLQKYR 113 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 434 aa Download sequence
MLNLHLSSFW RQKMYHHQHQ HQGKNIHPSS RMSIPPERHL FLKGGNGPGD SGLVLSTDAK 60 PRLKWTPDLH ERFIEAVNQL GGADKATPKT VMKLMGIPGL TLYHLKSHLQ KYRLSKNLHG 120 QANNGSNKIG AVAMAGDRMP EGNGTHMNNL SIGPQTNKGI QIGEALQMQI EVQRKLHEQL 180 EQVQRHLQLR IEAQGKYLQA VLEKAQETLG RQNLGTVGLE AAKVQLSELV SKVSNQCLNS 240 AFSDLKDLQG LCPQQTQAIP PTDCSMDSCL TSCEGSQKEQ EIHNNGMCLR PYNSSSLLEQ 300 RDQIAEDPLL PQNGLKPFED IKESKMFLSS IGIDAERRMF FADRSSSDLS ISVGFQGEKG 360 HGSNNNNNNS SSNFSERNFE GRNEEDSFLD QGNKRAETVN RLPYFPTKLD LNVHDENDAA 420 SSCKQFDLNG LSWS

Sequence ? help Back to Top

Protein Sequence Length: 434 aa Download sequence

MLNLHLSSFW RQKMYHHQHQ HQGKNIHPSS RMSIPPERHL FLKGGNGPGD SGLVLSTDAK  60
PRLKWTPDLH ERFIEAVNQL GGADKATPKT VMKLMGIPGL TLYHLKSHLQ KYRLSKNLHG  120
QANNGSNKIG AVAMAGDRMP EGNGTHMNNL SIGPQTNKGI QIGEALQMQI EVQRKLHEQL  180
EQVQRHLQLR IEAQGKYLQA VLEKAQETLG RQNLGTVGLE AAKVQLSELV SKVSNQCLNS  240
AFSDLKDLQG LCPQQTQAIP PTDCSMDSCL TSCEGSQKEQ EIHNNGMCLR PYNSSSLLEQ  300
RDQIAEDPLL PQNGLKPFED IKESKMFLSS IGIDAERRMF FADRSSSDLS ISVGFQGEKG  360
HGSNNNNNNS SSNFSERNFE GRNEEDSFLD QGNKRAETVN RLPYFPTKLD LNVHDENDAA  420
SSCKQFDLNG LSWS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04030.3	1e-160	G2-like family protein