PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022720059.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

Trihelix

Protein Properties

Length: 650aa MW: 73970.4 Da PI: 6.9794

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022720059.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	48.9	1.8e-15	117	178	2	68
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikege 68 W+++evlaL+++r++me+++ + We+vs+k++e gf+r +++Ckek+e+ ++++ i+ ++ XP_022720059.1 117 WSNDEVLALLRIRSSMENWFPEF-----TWEHVSRKLAELGFKRRAEKCKEKFEEESRYFNSINCSK 178 ******************998.....9*****************************9988665 PP
2	trihelix	94.4	1.1e-29	505	593	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgk....lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 rW+++evl+Li++r ++ ++ +k k+plWe++s+ m e g++rs+k+Ckekwen+nk+++k+k+ +kkr s +s+tcpyf+ql XP_022720059.1 505 RWPRDEVLTLINLRCSLYNNGDHNKegavIKAPLWERISQGMLELGYKRSAKRCKEKWENINKYFRKTKDVNKKR-SLDSRTCPYFHQLS 593 8************9999999866566699***************************************8.9999******95 PP

Sequence ? help Back to Top
Protein Sequence Length: 650 aa Download sequence
MFDGVPDQLQ QFIASAAAAR TRTHLPLPLS FPSLHNLASS NGFTPFDPLF TSNNSHHHQV 60 PPQLQQPHFL HPLHHQHQPC QKNNEEKDEN TSLVGMNMEI ERERSMADEP IDTHQPWSND 120 EVLALLRIRS SMENWFPEFT WEHVSRKLAE LGFKRRAEKC KEKFEEESRY FNSINCSKNY 180 RIFSELEDLC QGENPPLSQP HHHHIQQVVA AEKNKNVEKS RENEDNMGQN LEGDSRNIDE 240 YQTSAGNNAS DQDNEKVVEN KANNNKINIS NKKRKRQKKF EMLKGFCEDI VNKLMNQQEE 300 MHSKLLEDMV KRDEEKVARE EAWKKQELDR LKQELELRAK EQAIAGDRQA TIIKFLSKFS 360 STGSSKKQCF GRSNEDLVKV TNEYSNPPST SSSLVPPLNP NPTVNNQNKV DQVSTTTSST 420 MILGHQNSGS CTTQNNQIKP TSMTETQAPE NPNPKTPTSS KLALAPQNPN SVNAQSNPLS 480 PTSPLTVKKA PQNPPSNDKE DPGQRWPRDE VLTLINLRCS LYNNGDHNKE GAVIKAPLWE 540 RISQGMLELG YKRSAKRCKE KWENINKYFR KTKDVNKKRS LDSRTCPYFH QLSTLYNQGA 600 LIAPSEGPEN HLDLPETGID SSQKGAKDST LNVSEGDTNM VQLPAFEFEF

Sequence ? help Back to Top

Protein Sequence Length: 650 aa Download sequence

MFDGVPDQLQ QFIASAAAAR TRTHLPLPLS FPSLHNLASS NGFTPFDPLF TSNNSHHHQV  60
PPQLQQPHFL HPLHHQHQPC QKNNEEKDEN TSLVGMNMEI ERERSMADEP IDTHQPWSND  120
EVLALLRIRS SMENWFPEFT WEHVSRKLAE LGFKRRAEKC KEKFEEESRY FNSINCSKNY  180
RIFSELEDLC QGENPPLSQP HHHHIQQVVA AEKNKNVEKS RENEDNMGQN LEGDSRNIDE  240
YQTSAGNNAS DQDNEKVVEN KANNNKINIS NKKRKRQKKF EMLKGFCEDI VNKLMNQQEE  300
MHSKLLEDMV KRDEEKVARE EAWKKQELDR LKQELELRAK EQAIAGDRQA TIIKFLSKFS  360
STGSSKKQCF GRSNEDLVKV TNEYSNPPST SSSLVPPLNP NPTVNNQNKV DQVSTTTSST  420
MILGHQNSGS CTTQNNQIKP TSMTETQAPE NPNPKTPTSS KLALAPQNPN SVNAQSNPLS  480
PTSPLTVKKA PQNPPSNDKE DPGQRWPRDE VLTLINLRCS LYNNGDHNKE GAVIKAPLWE  540
RISQGMLELG YKRSAKRCKE KWENINKYFR KTKDVNKKRS LDSRTCPYFH QLSTLYNQGA  600
LIAPSEGPEN HLDLPETGID SSQKGAKDST LNVSEGDTNM VQLPAFEFEF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	272	279	KKRKRQKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28300.1	1e-101	Trihelix family protein