PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022719260.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GATA
Protein Properties Length: 294aa    MW: 32497.8 Da    PI: 9.4442
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022719260.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA53.72.8e-17221255135
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C++C +  Tp+WR gp g+ktLCnaCG++y++ +l
  XP_022719260.1 221 CTHCLAQRTPQWRAGPLGPKTLCNACGVRYKSGRL 255
                     *******************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 294 aa     Download sequence    
MDFRRNVSVS GEFQQEQVLS SPCSKLGATL AAATGSLDDL FPDHNTEVDV SLEWLSIFVE  60
DCLSSTGNCI PVAAAATNVQ NKSTTATKPA KSMKQKAQQT PPSLQKFVVP GKARSKRKRA  120
ATTLSKTKIN PFSSWSYHLN SPNQNLQLAS SDPPLLQQTY WLADSELIVP KKEDDSSNSS  180
SNLVGNSEVE EPKKERMEVE KVVVLESNSG QQQLLQQPRR CTHCLAQRTP QWRAGPLGPK  240
TLCNACGVRY KSGRLLPEYR PAKSPTFVSY LHSNSHKKVM EMRMSLFSSI PSEQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32890.18e-38GATA family protein