PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022719091.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 722aa MW: 77246.2 Da PI: 5.6411

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022719091.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	50.7	3.3e-16	467	513	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn ErrRRdriN+++ L+el+P++ K++Ka++L +A+eY+k Lq XP_022719091.1 467 VHNLSERRRRDRINEKMRALQELIPNC-----NKVDKASMLDEAIEYLKTLQ 513 6***********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 722 aa Download sequence
MPLSELHRMA RGKLDSSQDK KTSCSTDLSF VPENDFVELV WENGQILMQD QSNRARKITA 60 CNSLLSHSLP LHTPKTRDRD TGNGGTNTKM GKFGGMDSAL GEITMSVPSG EMGLNQDDEV 120 VPWLNYPVDQ SLQNEYSDFL PDLSGVTANE TPTHSNFASF DRSSQSIRDS SIVFLNDSAG 180 FEQRNLSKVP RPADGETKPR SGTSLLCTQL CQTSSPYFRS RILENIGNSL GNTSAHHAIC 240 GDSMGVQTSD EALPGIKMKK KDPILPCNNT VLMNFSNFSR PAALVKASLQ NIGAMASIER 300 IGSKEKGAAV SISNAADTTL IDSNIGLQKE KLSHCQPTIV LMNTDIKESE ANSLDEPVSA 360 EPTDTICEEN VLKNDRNPSQ VIGERASKRL PDGDKAVEPV LAASSVCSGN SVEKACDDPV 420 YNLKRKNCDN EESGCPSEDA EEESVGVKKA VPARGGTGSK RSRAAEVHNL SERRRRDRIN 480 EKMRALQELI PNCNKVDKAS MLDEAIEYLK TLQVQVQIMS MGAGLYMSPM MLPTGMQHIH 540 AAHVVHCSPM GVGMGMGMGF GMPLPDMNAG SSACPMVQVP PIPGAPFSGP RPHTSGPTAL 600 HGMAGPNLQL YGLPGQGLPM SMPCAPLIPI SGGHLMKSAM GLSACGLVGP MDNTDSGTAS 660 SSKDSPLNIN SQVAQNAKAN SSMNQTSTQC PMTNESFEQP AMVQENGQAT EITGTAPFSL 720 WK

Sequence ? help Back to Top

Protein Sequence Length: 722 aa Download sequence

MPLSELHRMA RGKLDSSQDK KTSCSTDLSF VPENDFVELV WENGQILMQD QSNRARKITA  60
CNSLLSHSLP LHTPKTRDRD TGNGGTNTKM GKFGGMDSAL GEITMSVPSG EMGLNQDDEV  120
VPWLNYPVDQ SLQNEYSDFL PDLSGVTANE TPTHSNFASF DRSSQSIRDS SIVFLNDSAG  180
FEQRNLSKVP RPADGETKPR SGTSLLCTQL CQTSSPYFRS RILENIGNSL GNTSAHHAIC  240
GDSMGVQTSD EALPGIKMKK KDPILPCNNT VLMNFSNFSR PAALVKASLQ NIGAMASIER  300
IGSKEKGAAV SISNAADTTL IDSNIGLQKE KLSHCQPTIV LMNTDIKESE ANSLDEPVSA  360
EPTDTICEEN VLKNDRNPSQ VIGERASKRL PDGDKAVEPV LAASSVCSGN SVEKACDDPV  420
YNLKRKNCDN EESGCPSEDA EEESVGVKKA VPARGGTGSK RSRAAEVHNL SERRRRDRIN  480
EKMRALQELI PNCNKVDKAS MLDEAIEYLK TLQVQVQIMS MGAGLYMSPM MLPTGMQHIH  540
AAHVVHCSPM GVGMGMGMGF GMPLPDMNAG SSACPMVQVP PIPGAPFSGP RPHTSGPTAL  600
HGMAGPNLQL YGLPGQGLPM SMPCAPLIPI SGGHLMKSAM GLSACGLVGP MDNTDSGTAS  660
SSKDSPLNIN SQVAQNAKAN SSMNQTSTQC PMTNESFEQP AMVQENGQAT EITGTAPFSL  720
WK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	472	477	ERRRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09530.2	2e-63	bHLH family protein