PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022719033.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

G2-like

Protein Properties

Length: 456aa MW: 50474.4 Da PI: 5.1483

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022719033.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	107	1e-33	230	284	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr+rWtpeLHe+Fveav+qLGGse+AtPk +l+l++v+gLt++hvkSHLQkYR+ XP_022719033.1 230 KPRMRWTPELHEAFVEAVNQLGGSERATPKGVLKLINVEGLTIYHVKSHLQKYRT 284 79****************************************************8 PP
2	Myb_DNA-binding	55.8	1.1e-17	232	283	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++e +v+av+qlGg t+k + + ++ +g+t +++ks++qky+ XP_022719033.1 232 RMRWTPELHEAFVEAVNQLGGSeraTPKGVLKLINvEGLTIYHVKSHLQKYR 283 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 456 aa Download sequence
MSSSFPALPT PFKVSYPMLS GPLQVSSGRE VMKASVLPKE SLLPLPTDGT PGNLFPSLSI 60 TTNDMHASAL ARDQHSQNPA FISQSSRELA SLPPIDSSFS EQPSALINHP QENNVSWCLD 120 RLQNFLDLPE NVPGPNELVE SSTGVMASND HNKRINWQEW ADQLISVDDA LDTDWNEILG 180 DTNVSDPKLK VLKPSGDISK QQPQFHQNQP AAHGEFSSDA YPSITAPPTK PRMRWTPELH 240 EAFVEAVNQL GGSERATPKG VLKLINVEGL TIYHVKSHLQ KYRTARYKPE SSEGTSEKKM 300 TSIEDMKSLD LKTSIGITEA LRLQIEVQKQ LHEQLEIQRN LQLRIEEQGR YLQMMFEKQK 360 RMEDEKSGGT SSALDAPPAP LPGSMFPSCT ADKSEVLEQV HTRTGITTGN ASTTEEKSPQ 420 DVSRKQKGSE TETTDHVETN EDESGSPLSK RARTEK

Sequence ? help Back to Top

Protein Sequence Length: 456 aa Download sequence

MSSSFPALPT PFKVSYPMLS GPLQVSSGRE VMKASVLPKE SLLPLPTDGT PGNLFPSLSI  60
TTNDMHASAL ARDQHSQNPA FISQSSRELA SLPPIDSSFS EQPSALINHP QENNVSWCLD  120
RLQNFLDLPE NVPGPNELVE SSTGVMASND HNKRINWQEW ADQLISVDDA LDTDWNEILG  180
DTNVSDPKLK VLKPSGDISK QQPQFHQNQP AAHGEFSSDA YPSITAPPTK PRMRWTPELH  240
EAFVEAVNQL GGSERATPKG VLKLINVEGL TIYHVKSHLQ KYRTARYKPE SSEGTSEKKM  300
TSIEDMKSLD LKTSIGITEA LRLQIEVQKQ LHEQLEIQRN LQLRIEEQGR YLQMMFEKQK  360
RMEDEKSGGT SSALDAPPAP LPGSMFPSCT ADKSEVLEQV HTRTGITTGN ASTTEEKSPQ  420
DVSRKQKGSE TETTDHVETN EDESGSPLSK RARTEK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G29000.2	1e-105	G2-like family protein