PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022716724.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

HB-other

Protein Properties

Length: 832aa MW: 93288.9 Da PI: 5.6533

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022716724.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	14	8.6e-05	605	665	1	54
TT--SS--HHHHHHHHHHHHHSSS-..-HHHHHHHHHHC.....TS-HHHHHHHHHHHHHH CS Homeobox 1 rrkRttftkeqleeLeelFeknryp..saeereeLAkkl.....gLterqVkvWFqNrRak 54 +rkRt +++eq+++ e++ ++ + ++++++ A+kl ++t +q ++W Nr+a+ XP_022716724.1 605 KRKRTIMNDEQVTIIERALLDEPEMqrNTASIQSWADKLchhgsEVTCSQLRNWLNNRKAR 665 79****************97777225678***************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 832 aa Download sequence
MRQGKEEAIC SVEQILLDDV RVSEQLIDLV FYVLIVLNDY RQDIHDSSPV PLLHSALVAC 60 SLYLLTGCIS SQWLDLALVI VAHPKVDVFM DVACRAVHLV VRFLQNKLSA QHTDNCLKLS 120 PTAESMVNYL CQQCEASLQF LQLLCQQKPF RERLLTNKEL CGKGGILFLA QSILKLHGPY 180 FVESSTVMAA LSRLKAKVLS ILLHLCEAES ISYLDEVASS PGSLDLAKSV ALEVLGLLKT 240 GLSKDPKHLS ASSDRTYPMG HLQLNAMRLA DIFSDDSNFR SYITIHFTEF LSAIFSLSHG 300 DFLSMWCSAD LPAREEDATL YYELFPAAGW ALDSVSSSDL SNTTNLEFTF IPNNNMPQAS 360 YVHQRTSLFV KVIANLHCFV PNICEEQERN LFLNKFLGCL RMDPSKLLPG FAFISGSQKV 420 AAIYRNLRSL LSHAESLIPA FLNEDDLRLL RVFFDQLQSL INPSEFEENR VQDDRSLGGC 480 SSPLLRREPQ NLNNRNGNLK EEMSENSAFQ EDEQFYVRSN HMDQADDITR QDMIDDKNKP 540 VSRSGLKEID RDVQNVETSG SDTSSTKGKN ATDKLVDRLK ESTHPGVRED DKVETVQTEE 600 KQRRKRKRTI MNDEQVTIIE RALLDEPEMQ RNTASIQSWA DKLCHHGSEV TCSQLRNWLN 660 NRKARLARLS KDARPPPEPD NAFAGKQGGP QQGHSLKAPD SPGQETAPSN TRGTRSMSRI 720 NTSENPEASE FVDFGAAEFV QCKPGQFVVL VDGIGEEIGK GKVHQVQGKW CGKSLEESGT 780 CVVDVVDLKA DRWVKLPYPS EATGTSFEEA EKKVGVMRVM WDSNKIYLLR PQ

Sequence ? help Back to Top

Protein Sequence Length: 832 aa Download sequence

MRQGKEEAIC SVEQILLDDV RVSEQLIDLV FYVLIVLNDY RQDIHDSSPV PLLHSALVAC  60
SLYLLTGCIS SQWLDLALVI VAHPKVDVFM DVACRAVHLV VRFLQNKLSA QHTDNCLKLS  120
PTAESMVNYL CQQCEASLQF LQLLCQQKPF RERLLTNKEL CGKGGILFLA QSILKLHGPY  180
FVESSTVMAA LSRLKAKVLS ILLHLCEAES ISYLDEVASS PGSLDLAKSV ALEVLGLLKT  240
GLSKDPKHLS ASSDRTYPMG HLQLNAMRLA DIFSDDSNFR SYITIHFTEF LSAIFSLSHG  300
DFLSMWCSAD LPAREEDATL YYELFPAAGW ALDSVSSSDL SNTTNLEFTF IPNNNMPQAS  360
YVHQRTSLFV KVIANLHCFV PNICEEQERN LFLNKFLGCL RMDPSKLLPG FAFISGSQKV  420
AAIYRNLRSL LSHAESLIPA FLNEDDLRLL RVFFDQLQSL INPSEFEENR VQDDRSLGGC  480
SSPLLRREPQ NLNNRNGNLK EEMSENSAFQ EDEQFYVRSN HMDQADDITR QDMIDDKNKP  540
VSRSGLKEID RDVQNVETSG SDTSSTKGKN ATDKLVDRLK ESTHPGVRED DKVETVQTEE  600
KQRRKRKRTI MNDEQVTIIE RALLDEPEMQ RNTASIQSWA DKLCHHGSEV TCSQLRNWLN  660
NRKARLARLS KDARPPPEPD NAFAGKQGGP QQGHSLKAPD SPGQETAPSN TRGTRSMSRI  720
NTSENPEASE FVDFGAAEFV QCKPGQFVVL VDGIGEEIGK GKVHQVQGKW CGKSLEESGT  780
CVVDVVDLKA DRWVKLPYPS EATGTSFEEA EKKVGVMRVM WDSNKIYLLR PQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	603	608	RRKRKR