PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022716242.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

FAR1

Protein Properties

Length: 693aa MW: 80421.3 Da PI: 6.2187

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022716242.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	67.8	2.7e-21	67	158	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHela 90 ++Y ++A++ GFs+rk++s+ s + g i+kr+fvC+++g++ +kk + +++r r++ r+gC+ak+ ++ke ++w v ++++ HnHel XP_022716242.1 67 EYYGNFARKNGFSIRKERSRLSPQLG-IYKRDFVCYRSGFAPVRKKPSGEHHRDRKSVRCGCDAKMYLSKEVidgVSQWFVVQFSNVHNHELL 158 59******************8888.***************************************99867789***********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 693 aa Download sequence
MTSIPSKNMW IRRQQCPCGD WKCYVTYEGD AETSITSQMV KAESSQSESM VAPYVGMVFK 60 TDEDAFEYYG NFARKNGFSI RKERSRLSPQ LGIYKRDFVC YRSGFAPVRK KPSGEHHRDR 120 KSVRCGCDAK MYLSKEVIDG VSQWFVVQFS NVHNHELLED DQVRLLPAYR KIHEADQERI 180 LLLSKAGFPI HRIVKVLELE KGIQGGQLPF LERDVRNFVQ NRKKVVQEND ALLNEKREND 240 TMELLEACKA TKEADQDFVY DFTVDQNDKV ENIAWSYGDA VNSYAIFGDV IYFDTTYRSI 300 TYDMLFGAWI GIDNNGRPIF FGCVLLLDET LRSFAWALQM LIRFMKGRCP QTILTDLDPG 360 LRDAIRSELP TAKHVTSIWS ILPKVSSWFS LQLGSQYSEF KSEFDALYHL ESTEDFELRW 420 NQMVSIFGLG SDKHIALLYS LRTSWALSYV RGYFLARIAT AAYSKSVDAF LKGIFITQSC 480 LRRFFEQVGV AANLQNQRHP EVQYLHMKTC LPVEEHARQI LTPFAFNALQ HELIASMQYA 540 AHAASEMANG SYLVRHFRKI DGESLVIWIP EDEQIHCSCK EFESSGILCR HALRVFIDKN 600 YFQLPEKYFL SRWRRESSLM FYDDHSVHDN DDEWFQEFQS LTETLFTEST ITKERSDYIR 660 RELTKELTRL LNEVRDMPES DGAPMEFTLS PTG

Sequence ? help Back to Top

Protein Sequence Length: 693 aa Download sequence

MTSIPSKNMW IRRQQCPCGD WKCYVTYEGD AETSITSQMV KAESSQSESM VAPYVGMVFK  60
TDEDAFEYYG NFARKNGFSI RKERSRLSPQ LGIYKRDFVC YRSGFAPVRK KPSGEHHRDR  120
KSVRCGCDAK MYLSKEVIDG VSQWFVVQFS NVHNHELLED DQVRLLPAYR KIHEADQERI  180
LLLSKAGFPI HRIVKVLELE KGIQGGQLPF LERDVRNFVQ NRKKVVQEND ALLNEKREND  240
TMELLEACKA TKEADQDFVY DFTVDQNDKV ENIAWSYGDA VNSYAIFGDV IYFDTTYRSI  300
TYDMLFGAWI GIDNNGRPIF FGCVLLLDET LRSFAWALQM LIRFMKGRCP QTILTDLDPG  360
LRDAIRSELP TAKHVTSIWS ILPKVSSWFS LQLGSQYSEF KSEFDALYHL ESTEDFELRW  420
NQMVSIFGLG SDKHIALLYS LRTSWALSYV RGYFLARIAT AAYSKSVDAF LKGIFITQSC  480
LRRFFEQVGV AANLQNQRHP EVQYLHMKTC LPVEEHARQI LTPFAFNALQ HELIASMQYA  540
AHAASEMANG SYLVRHFRKI DGESLVIWIP EDEQIHCSCK EFESSGILCR HALRVFIDKN  600
YFQLPEKYFL SRWRRESSLM FYDDHSVHDN DDEWFQEFQS LTETLFTEST ITKERSDYIR  660
RELTKELTRL LNEVRDMPES DGAPMEFTLS PTG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28530.1	0.0	FAR1 family protein