PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022159691.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family HD-ZIP
Protein Properties Length: 815aa    MW: 90556 Da    PI: 5.7827
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022159691.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox62.75.5e-2095150156
                     TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     +++ +++t+ q++e+e+lF+++++p+ ++r +L+++lgL+ rqVk+WFqNrR+++k
  XP_022159691.1  95 KKRYHRHTARQIQEMETLFKECPHPDDKQRLKLSQELGLKPRQVKFWFQNRRTQMK 150
                     688899***********************************************998 PP
2START159.91.9e-502965222206
                     HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS...............SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....E CS
           START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskv..............dsgealrasgvvdmvlallveellddkeqWdetla....k 78 
                     la + ++elvk+  ++ep+W ++   e g+evl  +e ++               +++ea r s+vv+m++ +lv  +ld + +W e ++    +
  XP_022159691.1 296 LAVSSMAELVKMCRSTEPLWLRDT--ESGKEVLNVEEHARMfpwplnlkqhltdeFTTEATRHSAVVIMNSITLVDAFLDAN-KWMELFPsivaR 387
                     577899******************..99*****999988889****************************************.******99999* PP

                     EEEEEEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE..TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEE CS
           START  79 aetlevissg......galqlmvaelqalsplvp.RdfvfvRyirq.lgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvt 165
                     a+t++viss       g lqlm+aelq lspl p R+  f+R+++q  ++g+w++vd  +ds  +   ++s+ R +++pSg++i++++ng+s+vt
  XP_022159691.1 388 AKTVQVISSSvsghasGSLQLMYAELQSLSPLIPtREAHFLRCCQQnAEEGSWAVVDFPIDSFHDGL-QHSFPRYRRRPSGCIIQDMPNGYSRVT 481
                     *****************************************************************98.9************************** PP

                     EEE-EE--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
           START 166 wvehvdlkgrlphwllrslvksglaegaktwvatlqrqcek 206
                     wveh++ +++ +h++++ lv+sg+a+ga++w+a lqrqce+
  XP_022159691.1 482 WVEHAEIEEKPIHQIFNNLVQSGMAFGANRWLAILQRQCER 522
                     ***************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 815 aa     Download sequence    
MYGDCQVMSS NMGGNMVSSE SIFSSPIQNP NFNFMSNFQH FPSIVPKEEN GLMMRSGKDD  60
MESGSGSEQI VEENVAGIEM ESNDHNIILQ QNQKKKRYHR HTARQIQEME TLFKECPHPD  120
DKQRLKLSQE LGLKPRQVKF WFQNRRTQMK AQQDRADNVI LRAENETLKN ENYRLQSALR  180
NIICPSCGGQ SILGEPSLDE QQLRLENARL REQLEQVCSL TSRYTGRPIQ GMPSTAPLMA  240
PSLDLDMNIY SRQYTEAMVS SGDMIMPLPS MLPPEAAHFP EGGLLIEEEK TLAMDLAVSS  300
MAELVKMCRS TEPLWLRDTE SGKEVLNVEE HARMFPWPLN LKQHLTDEFT TEATRHSAVV  360
IMNSITLVDA FLDANKWMEL FPSIVARAKT VQVISSSVSG HASGSLQLMY AELQSLSPLI  420
PTREAHFLRC CQQNAEEGSW AVVDFPIDSF HDGLQHSFPR YRRRPSGCII QDMPNGYSRV  480
TWVEHAEIEE KPIHQIFNNL VQSGMAFGAN RWLAILQRQC ERIASLMARN ISDLGVIPSP  540
EARQNLMKLA QRMIRTFSLN ISTSGGQSWT ALSDSPDDTV RITTRKIVEP GQPNGVILSA  600
VSTTWLPYPP YRVFDLLRDE RRRSQLEVLS NGNSLHEVAH IANGSHPGNC ISLLRINVAS  660
NSSQHVELML QESCTDQSGS LVVYSTIDVD SIQLAMSGED PSCIPLLPIG FSIIPVVGLT  720
ADGHPLPPPD VDGSTAAVVN SGCLLTVGLQ VLASTIPSAK LNLSSVTAIN NHLCNTVHQI  780
NAALDSSTRL DNSNTIVEVK NVPPLSPPPP PPPKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G46880.10.0HD-ZIP family protein