PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022159249.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

bHLH

Protein Properties

Length: 512aa MW: 56588.5 Da PI: 6.849

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022159249.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	49.5	7.6e-16	291	337	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 hn Er+RRdriN+++ L+el+P + K +Ka++L +A+eY+ksLq XP_022159249.1 291 VHNLSERKRRDRINEKMKALQELIPRgN------KADKASMLDEAIEYLKSLQ 337 6**********************955......****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 512 aa Download sequence
MNHCVPDFET DDDFSLPTSS APSLCKASSI RSDGEVIELV WKNRQVVMQN QTQNSGTKSN 60 GTTVTAEQIR NRDIRALHQE EKPELFMQED EMVSWLQYPL DEEPPLDHSF CDQLVYTTQP 120 QSIEQNASVT AQVRTSYGME FRPVTPMSTT ATSTMIARPP IPPMRTTESE MNTNSFGLFS 180 RYTRSVESGP SSSRSTVRES PASELRRTAI ADASSGGLAC RLMSGGGVAA TSSAEPTIRR 240 TTSLEDRKRK GKEKDDPEYQ CHSTDVEFET SDAKKQVRVP TSTKRSRAAE VHNLSERKRR 300 DRINEKMKAL QELIPRGNKA DKASMLDEAI EYLKSLQLQV QMMSMGCGML PMMFPGMQQF 360 VPPMGMGLGM GMGMETSANR PMMPYPNMLA GSTFPRQAGA AQLGPTFPFA AFHMAHIASN 420 DPSRIQGTNQ SDPMHSSPGM QNINQSRMSS SLDGYQQFLG SQQMQVPAAV SQRSPQNQPA 480 APPGTHNQHT NSRSGLENIE NYKSGNRTMD PC

Sequence ? help Back to Top

Protein Sequence Length: 512 aa Download sequence

MNHCVPDFET DDDFSLPTSS APSLCKASSI RSDGEVIELV WKNRQVVMQN QTQNSGTKSN  60
GTTVTAEQIR NRDIRALHQE EKPELFMQED EMVSWLQYPL DEEPPLDHSF CDQLVYTTQP  120
QSIEQNASVT AQVRTSYGME FRPVTPMSTT ATSTMIARPP IPPMRTTESE MNTNSFGLFS  180
RYTRSVESGP SSSRSTVRES PASELRRTAI ADASSGGLAC RLMSGGGVAA TSSAEPTIRR  240
TTSLEDRKRK GKEKDDPEYQ CHSTDVEFET SDAKKQVRVP TSTKRSRAAE VHNLSERKRR  300
DRINEKMKAL QELIPRGNKA DKASMLDEAI EYLKSLQLQV QMMSMGCGML PMMFPGMQQF  360
VPPMGMGLGM GMGMETSANR PMMPYPNMLA GSTFPRQAGA AQLGPTFPFA AFHMAHIASN  420
DPSRIQGTNQ SDPMHSSPGM QNINQSRMSS SLDGYQQFLG SQQMQVPAAV SQRSPQNQPA  480
APPGTHNQHT NSRSGLENIE NYKSGNRTMD PC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	296	301	ERKRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G20180.2	2e-56	bHLH family protein