PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022159238.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

bHLH

Protein Properties

Length: 514aa MW: 56863.8 Da PI: 6.849

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022159238.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	48.6	1.5e-15	291	339	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn Er+RRdriN+++ L+el+P ++ +Ka++L +A+eY+ksLq XP_022159238.1 291 VHNLSERKRRDRINEKMKALQELIPRG---NKFQADKASMLDEAIEYLKSLQ 339 6***********************8...8899***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 514 aa Download sequence
MNHCVPDFET DDDFSLPTSS APSLCKASSI RSDGEVIELV WKNRQVVMQN QTQNSGTKSN 60 GTTVTAEQIR NRDIRALHQE EKPELFMQED EMVSWLQYPL DEEPPLDHSF CDQLVYTTQP 120 QSIEQNASVT AQVRTSYGME FRPVTPMSTT ATSTMIARPP IPPMRTTESE MNTNSFGLFS 180 RYTRSVESGP SSSRSTVRES PASELRRTAI ADASSGGLAC RLMSGGGVAA TSSAEPTIRR 240 TTSLEDRKRK GKEKDDPEYQ CHSTDVEFET SDAKKQVRVP TSTKRSRAAE VHNLSERKRR 300 DRINEKMKAL QELIPRGNKF QADKASMLDE AIEYLKSLQL QVQMMSMGCG MLPMMFPGMQ 360 QFVPPMGMGL GMGMGMETSA NRPMMPYPNM LAGSTFPRQA GAAQLGPTFP FAAFHMAHIA 420 SNDPSRIQGT NQSDPMHSSP GMQNINQSRM SSSLDGYQQF LGSQQMQVPA AVSQRSPQNQ 480 PAAPPGTHNQ HTNSRSGLEN IENYKSGNRT MDPC

Sequence ? help Back to Top

Protein Sequence Length: 514 aa Download sequence

MNHCVPDFET DDDFSLPTSS APSLCKASSI RSDGEVIELV WKNRQVVMQN QTQNSGTKSN  60
GTTVTAEQIR NRDIRALHQE EKPELFMQED EMVSWLQYPL DEEPPLDHSF CDQLVYTTQP  120
QSIEQNASVT AQVRTSYGME FRPVTPMSTT ATSTMIARPP IPPMRTTESE MNTNSFGLFS  180
RYTRSVESGP SSSRSTVRES PASELRRTAI ADASSGGLAC RLMSGGGVAA TSSAEPTIRR  240
TTSLEDRKRK GKEKDDPEYQ CHSTDVEFET SDAKKQVRVP TSTKRSRAAE VHNLSERKRR  300
DRINEKMKAL QELIPRGNKF QADKASMLDE AIEYLKSLQL QVQMMSMGCG MLPMMFPGMQ  360
QFVPPMGMGL GMGMGMETSA NRPMMPYPNM LAGSTFPRQA GAAQLGPTFP FAAFHMAHIA  420
SNDPSRIQGT NQSDPMHSSP GMQNINQSRM SSSLDGYQQF LGSQQMQVPA AVSQRSPQNQ  480
PAAPPGTHNQ HTNSRSGLEN IENYKSGNRT MDPC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	296	301	ERKRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G20180.2	2e-54	bHLH family protein