PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022158998.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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Family | GeBP | ||||||||
Protein Properties | Length: 234aa MW: 27215.3 Da PI: 8.557 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 54.1 | 4.5e-17 | 63 | 150 | 6 | 98 |
DUF573 6 lwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfske.hdqkifelskkiWgs 98 ws +De v+L+ + +f+ k+g s+s ++fy+fvk+++s++vs+sql++K+ rL+k+f k++ k k ++fsk + +k +e+s+ iWgs XP_022158998.1 63 HWSWSDECVILKNFYEFAGKNG-SYS---KDFYHFVKNKLSVDVSNSQLSDKVYRLRKRFLKDECKGK--IRMKFSKGnQLEKLYEMSNNIWGS 150 5****************99999.434...56********************************99944..4455555404489*********95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 234 aa Download sequence |
MATNRYEIEG DDSGTNSKTG SETEDEGSRK MSSLKRGREK DEEKCSSPNS KEESKKSKKM 60 GFHWSWSDEC VILKNFYEFA GKNGSYSKDF YHFVKNKLSV DVSNSQLSDK VYRLRKRFLK 120 DECKGKIRMK FSKGNQLEKL YEMSNNIWGS NSNTQNTQSG GNQWKAEAVN RLCEEMFERV 180 IENVKVDISC IPPNVLXDIR KDWEQMKMAQ DEYELKNANL LLQISHIRCT QNNM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G00390.1 | 3e-10 | GeBP family protein |