PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022158616.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

bHLH

Protein Properties

Length: 335aa MW: 37590.5 Da PI: 7.3624

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022158616.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	38.3	2.4e-12	164	211	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 + h +Er+RR+++ ++f L ++P + kK++Ka++L A++Y+k+Lq XP_022158616.1 164 QDHILAERKRREKLSQRFIALSAIVPGL-----KKMDKASVLGDAIKYLKQLQ 211 56999*********************.....9****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 335 aa Download sequence
METSSTVVFS ELGMEESGFV NQWHKSSMDE LGTLPLAAAF GENLQHSYAQ ANFDQKASSN 60 HSHNAIFGYV KQLKTDGWSS YQTSDHLPNS QNIAYPTASV SASNCTNQMD FTRPKEEVVC 120 PQSISNLPSD MLISQGLFRH QGHITKSYHG TKRTATNSRF SQAQDHILAE RKRREKLSQR 180 FIALSAIVPG LKKMDKASVL GDAIKYLKQL QEKVKILEEQ TRRKDIESVV FVKKSQVSAD 240 GNNTSNEEDE PLPEIEARFC DKNVLIRIHC EKRKDVIEKT IAEIEKLHLT IVNSSVMSFG 300 SLALDITIIA QMGNEFSLTI EDLVKKLRST FGSFQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	170	175	ERKRRE
2	171	176	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37850.1	1e-66	bHLH family protein