PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022158602.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

Dof

Protein Properties

Length: 506aa MW: 54408.6 Da PI: 6.191

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022158602.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	122.4	1.6e-38	112	171	2	61
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 ++k+++cprC+s +tkfCy+nny+++qPr+fCk+C+ryWt+GG++rnvP+G+grr+nk+ XP_022158602.1 112 PDKIIPCPRCNSLETKFCYFNNYNVNQPRHFCKNCQRYWTAGGTMRNVPIGAGRRRNKQL 171 7899*****************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 506 aa Download sequence
MTTSTTQDVV SGAHFKDLAI KLFGRTIPLP ESQISSAVAL RNLDACNTLK KAEESVLVGA 60 EDSCPSERSS VLGGDNEENQ ASNGNNEELD PHSKEEQADG NSTEQERVFK KPDKIIPCPR 120 CNSLETKFCY FNNYNVNQPR HFCKNCQRYW TAGGTMRNVP IGAGRRRNKQ LASQYRQIIV 180 SSEGVATTRL ETSDTTNHHQ LLSGIESPPS LRPSTGNGTV LKFGPEAPLC ESMETVLSLG 240 DQKRSIEIGS AYCRDSPEEP SSCGSSMTTT SIRGNELPKS VVEREAVRLS GSSSEIAASN 300 TVHCYSVPQL VFPLNQGSNG VVSSAMAQSS DSTSVPNTSP HPNPVQWLPA TMLAVPGFCT 360 PSLPLQFVPA SCWGCTPVWT ATGATNLTVV PSDVCASQTS PATIGSCPTS SSPTLGKHSR 420 DANSLTEEEQ KSEKCVVVPK TLRVDNPSEA SRSPIWATFG IRPYPKETIS KGTVFETSET 480 NADGKGHFRE APHILEAKTG SFYSLL

Sequence ? help Back to Top

Protein Sequence Length: 506 aa Download sequence

MTTSTTQDVV SGAHFKDLAI KLFGRTIPLP ESQISSAVAL RNLDACNTLK KAEESVLVGA  60
EDSCPSERSS VLGGDNEENQ ASNGNNEELD PHSKEEQADG NSTEQERVFK KPDKIIPCPR  120
CNSLETKFCY FNNYNVNQPR HFCKNCQRYW TAGGTMRNVP IGAGRRRNKQ LASQYRQIIV  180
SSEGVATTRL ETSDTTNHHQ LLSGIESPPS LRPSTGNGTV LKFGPEAPLC ESMETVLSLG  240
DQKRSIEIGS AYCRDSPEEP SSCGSSMTTT SIRGNELPKS VVEREAVRLS GSSSEIAASN  300
TVHCYSVPQL VFPLNQGSNG VVSSAMAQSS DSTSVPNTSP HPNPVQWLPA TMLAVPGFCT  360
PSLPLQFVPA SCWGCTPVWT ATGATNLTVV PSDVCASQTS PATIGSCPTS SSPTLGKHSR  420
DANSLTEEEQ KSEKCVVVPK TLRVDNPSEA SRSPIWATFG IRPYPKETIS KGTVFETSET  480
NADGKGHFRE APHILEAKTG SFYSLL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39660.1	2e-46	Dof family protein