PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022158467.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 246aa MW: 27453.8 Da PI: 6.7755 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 60.2 | 3.3e-19 | 124 | 178 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ ++tk+q +Lee F+++++++ +++ LAk+lgL rqV vWFqNrRa+ k XP_022158467.1 124 RKKLRLTKDQSAVLEESFKEHNTLNPKQKLALAKQLGLRPRQVEVWFQNRRARTK 178 78889************************************************98 PP | |||||||
2 | HD-ZIP_I/II | 130 | 9.5e-42 | 124 | 213 | 1 | 91 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 +kk+rl+k+q+++LEesF+e+++L+p++K +la++Lgl+prqv+vWFqnrRARtk+kq+E+d+e+Lkr++++l+een+rL+kev+eLr +l XP_022158467.1 124 RKKLRLTKDQSAVLEESFKEHNTLNPKQKLALAKQLGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVAELR-AL 213 69*************************************************************************************9.55 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 246 aa Download sequence |
MMAAKDDLGL SLGLSFHSHR LASDHHLQLN LMPSPWNNDA TSFPSSSDRT SETGRSLLRG 60 IDVNRIPATA ADCEDEAAMS SPNSTVSSVS GKRSEREEAN GEDLDGDRAC SRGISDEEDG 120 ETSRKKLRLT KDQSAVLEES FKEHNTLNPK QKLALAKQLG LRPRQVEVWF QNRRARTKLK 180 QTEVDCEFLK RCCENLTEEN RRLQKEVAEL RALKLSPQLY MHMTPPTTLT MCPSCERVAV 240 PPSTSA |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 123 | 129 | SRKKLRL |
2 | 173 | 181 | RRARTKLKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G16780.1 | 2e-92 | HD-ZIP family protein |