PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022158436.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

Protein Properties

Length: 870aa MW: 96150.4 Da PI: 6.8808

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022158436.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	59.3	6.8e-19	336	435	1	98
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 f+kvl+ sd+++ grlvlpk +ae++ +++ e+ ++++d +g++W++++++ +++s++yvl+ G ++ +L++gD+v+F++++ +++ XP_022158436.1 336 FEKVLSASDAGRIGRLVLPKACAEAYfpPISQSEGLPVRIQDVKGNEWTFQFRFwpNNNSRMYVLE-GVTPCIQSMQLRAGDTVTFSRID-PGGQ 428 99************************555556677***********99899999999.*******************887.7777 PP .EEEEE- CS B3 92 lvvkvfr 98 lv+++++ XP_022158436.1 429 LVMGFRK 435 7777765 PP

Sequence ? help Back to Top
Protein Sequence Length: 870 aa Download sequence
MGSNRCMNTS CGAATPHDWT KGWPLGSAGF AHLCLKCGSA YENLIFCDTY HSEETGWRDC 60 SFCGKRIHCG CIASKSLFEC LDYGGVGCTS CVKRSQLDAI RRDEISNGFD AVTVGNVGLL 120 QSGSVEDRAV RNGINEEKLL QLCNIMEASE TDHFQQPQRV DRIASPVQNK RENFRSPFEE 180 VGTSFFNMTK LSVKRQPPVG SIMYSKLDTS RPLLELKDMQ ESLSRPSLNM TLGVPSGAPN 240 FVVPVSGSAA EEDEKSILPS FQQGQRSRPI FPKPLKTGAT VNSEARKGMV PMVRIARPPA 300 EGRGKNQLLP RYWPRITDQE LEQLAGDLNS TIVPLFEKVL SASDAGRIGR LVLPKACAEA 360 YFPPISQSEG LPVRIQDVKG NEWTFQFRFW PNNNSRMYVL EGVTPCIQSM QLRAGDTVTF 420 SRIDPGGQLV MGFRKATNST DMQDAKISTV PNGSHSGDAS YSGVFQNLPL RADGDISLHN 480 CENFGGKTND ASGQQPMLPV EKKGARNIGS KNKRLLMHSE DALELRLTWE EAQDLLRPPP 540 SANPTIVTID DHEFEEYDEP PVFGKRTIFT VTSTGEQKQW AQCDDCSKWR RLPVDVLLPP 600 KWTCSDNVWD LSRCTCSAPE EISTKEQENL LRASKDFKKR KIMKSQKSTQ DLEPSGLDAL 660 ASAAVLGDSM VDLQELGTTT RHPRHRPGCT CIVCIQPPSG KGKHKSTCTC NVCLTVKRRF 720 KTLMLRKKKR QSEREVETLL KDGNPQFDVS GMSGTVRDTL LHTDHSENEG SQSRIKDREA 780 AISSGQIDLN CHPDREDMQL EVAGLSMMSL VEAASQPLDS YTKQIGVSSV TSEQQSSQPS 840 SAESERRLSD EGCHGSGHES TSNGCREEHH

Sequence ? help Back to Top

Protein Sequence Length: 870 aa Download sequence

MGSNRCMNTS CGAATPHDWT KGWPLGSAGF AHLCLKCGSA YENLIFCDTY HSEETGWRDC  60
SFCGKRIHCG CIASKSLFEC LDYGGVGCTS CVKRSQLDAI RRDEISNGFD AVTVGNVGLL  120
QSGSVEDRAV RNGINEEKLL QLCNIMEASE TDHFQQPQRV DRIASPVQNK RENFRSPFEE  180
VGTSFFNMTK LSVKRQPPVG SIMYSKLDTS RPLLELKDMQ ESLSRPSLNM TLGVPSGAPN  240
FVVPVSGSAA EEDEKSILPS FQQGQRSRPI FPKPLKTGAT VNSEARKGMV PMVRIARPPA  300
EGRGKNQLLP RYWPRITDQE LEQLAGDLNS TIVPLFEKVL SASDAGRIGR LVLPKACAEA  360
YFPPISQSEG LPVRIQDVKG NEWTFQFRFW PNNNSRMYVL EGVTPCIQSM QLRAGDTVTF  420
SRIDPGGQLV MGFRKATNST DMQDAKISTV PNGSHSGDAS YSGVFQNLPL RADGDISLHN  480
CENFGGKTND ASGQQPMLPV EKKGARNIGS KNKRLLMHSE DALELRLTWE EAQDLLRPPP  540
SANPTIVTID DHEFEEYDEP PVFGKRTIFT VTSTGEQKQW AQCDDCSKWR RLPVDVLLPP  600
KWTCSDNVWD LSRCTCSAPE EISTKEQENL LRASKDFKKR KIMKSQKSTQ DLEPSGLDAL  660
ASAAVLGDSM VDLQELGTTT RHPRHRPGCT CIVCIQPPSG KGKHKSTCTC NVCLTVKRRF  720
KTLMLRKKKR QSEREVETLL KDGNPQFDVS GMSGTVRDTL LHTDHSENEG SQSRIKDREA  780
AISSGQIDLN CHPDREDMQL EVAGLSMMSL VEAASQPLDS YTKQIGVSSV TSEQQSSQPS  840
SAESERRLSD EGCHGSGHES TSNGCREEHH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	717	728	KRRFKTLMLRKK
2	717	730	KRRFKTLMLRKKKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G30470.1	0.0	B3 family protein