PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022158381.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family bHLH
Protein Properties Length: 308aa    MW: 33423.1 Da    PI: 6.0985
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022158381.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.18.9e-10158202554
                     HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     h+++Er RR+ri +++  L+el+P++      K + a++L + v+Y+k L
  XP_022158381.1 158 HSIAERLRRERIAERMKALQELVPSC-----NKSDRAAMLDEIVDYVKFL 202
                     99***********************8.....69***************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    
MAGIPSEGLG DDFFEQILAV PPAYGGDVVA MTMPMGLQLG SGGGGMAMPL GLNLEQGFLR  60
QERFREELDA QNNNNNASSS STASSGITER DSSVHHMTSL FPTFGHLQTQ ALRPPPPPLH  120
LHQPFHNQMT PGTVVAVPQP PQVRPRVRAR RGQATDPHSI AERLRRERIA ERMKALQELV  180
PSCNKSDRAA MLDEIVDYVK FLRLQVKVLS MSRLGGAGAV AQLVADVPLS SVEGEGIESA  240
SNQQAWEKWS SDGTEQQVAK LMEEDVGAAM QFLQSKALCI MPISLASAIF RTHQGDPPMI  300
VKPEMNTP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1163168RLRRER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G02590.33e-53bHLH family protein