PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022157453.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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Family | GRAS | ||||||||
Protein Properties | Length: 227aa MW: 25670.5 Da PI: 6.8674 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 175.2 | 4.9e-54 | 1 | 226 | 139 | 374 |
GRAS 139 ppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledle.leeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvk 232 pp l+iT+++s ++++ el t+e+L++fA+ l + fe +vl +++l++ + + L+v+++Ea+aVnl + ++++ s++l+ vL++vk XP_022157453.1 1 PPFLKITAFASTSTHDDFELGFTQENLKNFAHDLSIGFELEVLNMESLNSGSwPLPLNVSENEAIAVNLPV--GSFFNYSLPLPM----VLRFVK 89 79***********99****************************777777664266799************9..556666888888....****** PP GRAS 233 slsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpv 327 +l Pk+vv v++ +++ +++F r+++ l+ ys l++s++a + + +++ k+Er ll++ i+++v+ ++ + +e+l Wr+ + ++GF+p+ XP_022157453.1 90 HLCPKIVVSVDRGCNRMDAPFPFRVINGLQSYSGLLESMDAV-SVNLDTQLKIERYLLQPGIEKLVMSRHGS----NERLPPWRSLFLSSGFSPL 179 ***************************************876.56779*******************99888....9****************** PP GRAS 328 plsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374 ++s+++++qa++ll++++++g+++e+++ +lvl+W++++Lvs+SaWr XP_022157453.1 180 TFSNFTESQADCLLHRTPVQGFHIEKRHSTLVLCWQRKELVSISAWR 226 **********************************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 227 aa Download sequence |
PPFLKITAFA STSTHDDFEL GFTQENLKNF AHDLSIGFEL EVLNMESLNS GSWPLPLNVS 60 ENEAIAVNLP VGSFFNYSLP LPMVLRFVKH LCPKIVVSVD RGCNRMDAPF PFRVINGLQS 120 YSGLLESMDA VSVNLDTQLK IERYLLQPGI EKLVMSRHGS NERLPPWRSL FLSSGFSPLT 180 FSNFTESQAD CLLHRTPVQG FHIEKRHSTL VLCWQRKELV SISAWRC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G00150.1 | 6e-86 | GRAS family protein |