PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022157278.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

Protein Properties

Length: 894aa MW: 99251.7 Da PI: 6.5908

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022157278.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	55.2	1.3e-17	316	415	1	98
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 f+k l+ sd+++ grlv+pk +ae++ ++++e+ ++++d +g++W +++++ +++s++yvl+ G ++ +L++gD+v+F++++ e++ XP_022157278.1 316 FEKMLSASDAGRIGRLVVPKACAEAYfpPISQPEGLPIRIQDVKGKEWVFQFRFwpNNNSRMYVLE-GVTPCIQSMQLQAGDTVTFSRMD-PEGK 408 89************************555566778***********99899999999.*******************876.7777 PP .EEEEE- CS B3 92 lvvkvfr 98 l +++++ XP_022157278.1 409 LIMGFRK 415 7777766 PP

Sequence ? help Back to Top
Protein Sequence Length: 894 aa Download sequence
MASRTCMNVS CGTSSSTEWR KGWALRSGDF ATLCDKCGSA YEQSIFCDVF HLKDSGWREC 60 TSCGKHLHCG CIASKFLMEL HDSGGVSCIS CAKVLGLHTT GTGEKLNGLS TSQVQNSGEL 120 QSFLVEDGNA DRMRFIQPGN KTEVNELRQS LLSQSNNKNG SLVQMKREEN FPPAKDVGYL 180 CSLEFNQVTN GLDEATKQEI CKADSGTKFT YDSLALGCGN SNPLPGVSID DKEDSKSSSP 240 LLLGSRSRHL IPKPARSVFN IGLEPNASMV SQVRVARPPA EGRGRNQLLP RYWPRITDQE 300 LQQISGASNS TVVPLFEKML SASDAGRIGR LVVPKACAEA YFPPISQPEG LPIRIQDVKG 360 KEWVFQFRFW PNNNSRMYVL EGVTPCIQSM QLQAGDTVTF SRMDPEGKLI MGFRKASSSS 420 IMQDTHPTAL STGGHSSEFF SSFFENLPIL SGHSSLLQSL KGNMDPQLNL LPGYFNQPGA 480 DMSWQKAEKH DDNSREGLLL SSMLVPERKR TRNIGSKSKR LLIDCQDALE LKLTWEEVQD 540 LLRPPPTVKP SKFMVEDHEF EEYEEPPVFG KRSIFVVRST WGQEQWAQCD DCSKWRRLPV 600 DVLLPSKWTC VENIWDQSRS SCSTPEELTT RELENLLRLN KEFKRQRTLA FNRPIQDHES 660 SGLDALANAA TLGDNVSDPG AASVATTTKH PRHRPGCSCI VCIQPPSGKG KHKPTCTCNV 720 CMTVKRRFKT LMMRKKKRQS EREAEIAQKN QLKWGSKDET ELDNTSRHVS LNLGPSENET 780 QLTNDSRSQS NLVETGKDQL DLNCHPDQEN EIKGVSNRVS MMSLVQIASL PLETYLKQNG 840 LTSLLSEPQV SSASHVPAQG ANEVEGALND DGCFASTAQD QESEEEENRE KDQS

Sequence ? help Back to Top

Protein Sequence Length: 894 aa Download sequence

MASRTCMNVS CGTSSSTEWR KGWALRSGDF ATLCDKCGSA YEQSIFCDVF HLKDSGWREC  60
TSCGKHLHCG CIASKFLMEL HDSGGVSCIS CAKVLGLHTT GTGEKLNGLS TSQVQNSGEL  120
QSFLVEDGNA DRMRFIQPGN KTEVNELRQS LLSQSNNKNG SLVQMKREEN FPPAKDVGYL  180
CSLEFNQVTN GLDEATKQEI CKADSGTKFT YDSLALGCGN SNPLPGVSID DKEDSKSSSP  240
LLLGSRSRHL IPKPARSVFN IGLEPNASMV SQVRVARPPA EGRGRNQLLP RYWPRITDQE  300
LQQISGASNS TVVPLFEKML SASDAGRIGR LVVPKACAEA YFPPISQPEG LPIRIQDVKG  360
KEWVFQFRFW PNNNSRMYVL EGVTPCIQSM QLQAGDTVTF SRMDPEGKLI MGFRKASSSS  420
IMQDTHPTAL STGGHSSEFF SSFFENLPIL SGHSSLLQSL KGNMDPQLNL LPGYFNQPGA  480
DMSWQKAEKH DDNSREGLLL SSMLVPERKR TRNIGSKSKR LLIDCQDALE LKLTWEEVQD  540
LLRPPPTVKP SKFMVEDHEF EEYEEPPVFG KRSIFVVRST WGQEQWAQCD DCSKWRRLPV  600
DVLLPSKWTC VENIWDQSRS SCSTPEELTT RELENLLRLN KEFKRQRTLA FNRPIQDHES  660
SGLDALANAA TLGDNVSDPG AASVATTTKH PRHRPGCSCI VCIQPPSGKG KHKPTCTCNV  720
CMTVKRRFKT LMMRKKKRQS EREAEIAQKN QLKWGSKDET ELDNTSRHVS LNLGPSENET  780
QLTNDSRSQS NLVETGKDQL DLNCHPDQEN EIKGVSNRVS MMSLVQIASL PLETYLKQNG  840
LTSLLSEPQV SSASHVPAQG ANEVEGALND DGCFASTAQD QESEEEENRE KDQS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	725	736	KRRFKTLMMRKK
2	725	738	KRRFKTLMMRKKKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32010.1	0.0	B3 family protein