PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022157078.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

Trihelix

Protein Properties

Length: 390aa MW: 43633.6 Da PI: 8.5797

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022157078.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	56.5	7.2e-18	55	140	2	78
trihelix 2 WtkqevlaLiearremeerlrrgk..........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessst 78 Wt qe++ Li+a++ ++er ++++ + +W++v ++++++g++rs++qC++kw+nl ++ykk++e +++ + s s+ XP_022157078.1 55 WTLQETMILIAAKKLDDERRSKANlappdpaarkGGELRWKWVENYCWSQGCHRSQNQCNDKWDNLLRDYKKVREYDSRA-CASASE 140 ************999999987556666666547799***********************************99987.433333 PP

Sequence ? help Back to Top
Protein Sequence Length: 390 aa Download sequence
MSDPPTTSSE PPHQHQHQHQ HHQQLLHLPL IHGGATTSTT RSINAAAREY RKGNWTLQET 60 MILIAAKKLD DERRSKANLA PPDPAARKGG ELRWKWVENY CWSQGCHRSQ NQCNDKWDNL 120 LRDYKKVREY DSRACASASE QPSPSPSYWK MEKHERKDNN LPSNMPFEVY QALNDVVQRK 180 YSNSHRSGAT AAAVLPSPSS APPPPLPPTT TSPAASESSS GTESSEKRES METKRRKMGD 240 IGSSIERSAS ALAQALRSCE EQREIRHQQL MELQKRRLHI EETRNHLHRQ GIADLVAAVA 300 NLSGKNNRSS RSSEGYGSSS CLYSGEEVRV LKEQNEAMQA ELMGVKSELS QLRDQMPSLM 360 QTMMHNMIHN IPPPPNPHSS MDPTGSGGDA

Sequence ? help Back to Top

Protein Sequence Length: 390 aa Download sequence

MSDPPTTSSE PPHQHQHQHQ HHQQLLHLPL IHGGATTSTT RSINAAAREY RKGNWTLQET  60
MILIAAKKLD DERRSKANLA PPDPAARKGG ELRWKWVENY CWSQGCHRSQ NQCNDKWDNL  120
LRDYKKVREY DSRACASASE QPSPSPSYWK MEKHERKDNN LPSNMPFEVY QALNDVVQRK  180
YSNSHRSGAT AAAVLPSPSS APPPPLPPTT TSPAASESSS GTESSEKRES METKRRKMGD  240
IGSSIERSAS ALAQALRSCE EQREIRHQQL MELQKRRLHI EETRNHLHRQ GIADLVAAVA  300
NLSGKNNRSS RSSEGYGSSS CLYSGEEVRV LKEQNEAMQA ELMGVKSELS QLRDQMPSLM  360
QTMMHNMIHN IPPPPNPHSS MDPTGSGGDA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35640.1	1e-46	Trihelix family protein