PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022156800.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

MYB

Protein Properties

Length: 265aa MW: 29990.9 Da PI: 7.6154

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022156800.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	45.4	1.8e-14	23	75	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqkyl 48 rg+WT eEd ll+++++ +G g+W+ a+ ++Rt+k+c++rw++yl XP_022156800.1 23 RGPWTIEEDTLLIHYIAGHGEGQWNILAKQAAyyfpgLKRTGKSCRLRWLNYL 75 89*************************************************97 PP
2	Myb_DNA-binding	47.2	5.2e-15	81	124	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T +E++l+++++ ++G++ W++Ia+ ++ gRt++++k++w++ XP_022156800.1 81 RGNLTLQEQLLILELHSKWGNR-WSKIAQQLP-GRTDNEIKNFWRT 124 7899****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 265 aa Download sequence
MEAVRKSLSN RPISGEEISE LRRGPWTIEE DTLLIHYIAG HGEGQWNILA KQAAYYFPGL 60 KRTGKSCRLR WLNYLKPDVK RGNLTLQEQL LILELHSKWG NRWSKIAQQL PGRTDNEIKN 120 FWRTRVQKQA RQLKIEANNR RFLDVIRHLN VLEAMDDPTS NSFNFPPPSL HNTSLPNSSE 180 TTHLPANHGG GGAASPPGSV QWPEIVSAWP PSPCGEFVEK KQEPFCALGG WDGVAGCNAQ 240 TVAPDWLLED AMLENLWNNL DHNFI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68320.1	2e-58	MYB family protein