PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022156621.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

ARR-B

Protein Properties

Length: 462aa MW: 52484.5 Da PI: 6.8137

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022156621.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	89.2	3.7e-28	279	332	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k++++Wtp+LH++Fv+aveqL G+++A+P++ilelmkv+gLt+++v+SHLQkYR+ XP_022156621.1 279 KTKVDWTPDLHRKFVQAVEQL-GIDHAIPSKILELMKVEGLTRHNVASHLQKYRM 332 6799***************.******************************8 PP
2	Myb_DNA-binding	42.7	1.3e-13	282	331	2	48
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 WT++++ ++v+av+qlG + +++I + m +g+t+ ++ s++qky+ XP_022156621.1 282 VDWTPDLHRKFVQAVEQLGIDhaIPSKILELMKvEGLTRHNVASHLQKYR 331 57***********************************************7 PP
3	Response_reg	26.8	2.6e-10	20	126	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl+ d + +r+ le+ +y +v ++ d +eal + + +++ +l + + d e +k ++ ++ +lpii+ ++ +++ +++ +G XP_022156621.1 20 VLLLDRDSRSTTEIRSRLEEMEY-VVYSCCDEKEALSAILNTPgnFHVAILEVCTGNYD--ESFKLLEISK-DLPIIMTSDVHCLSTMMKCIALG 110 56666667777789999****.***********777677********76..4444444433.89**9999******* PP ESEEEESS--HHHHHH CS Response_reg 94 akdflsKpfdpeelvk 109 a +fl Kp ++e+l++ XP_022156621.1 111 AVEFLLKPLSEEKLRN 126 ***********987 PP

Sequence ? help Back to Top
Protein Sequence Length: 462 aa Download sequence
MVCTADDLQG WKDFPKGLRV LLLDRDSRST TEIRSRLEEM EYVVYSCCDE KEALSAILNT 60 PGNFHVAILE VCTGNYDESF KLLEISKDLP IIMTSDVHCL STMMKCIALG AVEFLLKPLS 120 EEKLRNIWQH VIHKAFSNPS KPDEESVASL MQLQLENEDK NGVPEDMEIL SWVQDIVWEQ 180 SEESEKSQLN QGASLICSWE SQDQMNDSRE TGCRDKETQS KLVKTTSHDL VCEEHLSESD 240 SQPQLSGKNK SGVKSSPSVA EHSIQGSDVN HSAGLKVKKT KVDWTPDLHR KFVQAVEQLG 300 IDHAIPSKIL ELMKVEGLTR HNVASHLQKY RMQKRHVIHR EEIPRWPHPR CSMQFNHLKP 360 IMAYPSSHPN CGLSVSAVYP TWRQTNGHPA NVHMWGPPGY RHWPQPGIQP WNSYTGVQAD 420 AWGCPVMLPS HAPYFSNPHH VSAPHNLYTV NKSHGMPQRM RR

Sequence ? help Back to Top

Protein Sequence Length: 462 aa Download sequence

MVCTADDLQG WKDFPKGLRV LLLDRDSRST TEIRSRLEEM EYVVYSCCDE KEALSAILNT  60
PGNFHVAILE VCTGNYDESF KLLEISKDLP IIMTSDVHCL STMMKCIALG AVEFLLKPLS  120
EEKLRNIWQH VIHKAFSNPS KPDEESVASL MQLQLENEDK NGVPEDMEIL SWVQDIVWEQ  180
SEESEKSQLN QGASLICSWE SQDQMNDSRE TGCRDKETQS KLVKTTSHDL VCEEHLSESD  240
SQPQLSGKNK SGVKSSPSVA EHSIQGSDVN HSAGLKVKKT KVDWTPDLHR KFVQAVEQLG  300
IDHAIPSKIL ELMKVEGLTR HNVASHLQKY RMQKRHVIHR EEIPRWPHPR CSMQFNHLKP  360
IMAYPSSHPN CGLSVSAVYP TWRQTNGHPA NVHMWGPPGY RHWPQPGIQP WNSYTGVQAD  420
AWGCPVMLPS HAPYFSNPHH VSAPHNLYTV NKSHGMPQRM RR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18020.5	1e-87	ARR-B family protein