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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | XP_022156620.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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| Family | HD-ZIP | ||||||||
| Protein Properties | Length: 237aa MW: 27554.8 Da PI: 5.0483 | ||||||||
| Description | HD-ZIP family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | Homeobox | 54.7 | 1.7e-17 | 63 | 113 | 6 | 56 |
S--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 6 tftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
++ +q+++Le++Fe ++++ +++ ++A++l+L+ rqV++WFqNrRa++k
XP_022156620.1 63 RLRLDQVKALERHFEVENKLEPDRKLKIAAELELEPRQVTIWFQNRRARWK 113
56779*********************************************9 PP
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| 2 | HD-ZIP_I/II | 118.1 | 4.9e-38 | 59 | 151 | 1 | 93 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93
e+krrl +qvk+LE++Fe e+kLep+rK ++a eL+l+prqv +WFqnrRAR+ktkqlE+dy +Lk +ydalk + + Lek++++L+++l+e
XP_022156620.1 59 ERKRRLRLDQVKALERHFEVENKLEPDRKLKIAAELELEPRQVTIWFQNRRARWKTKQLERDYGVLKVNYDALKLDYDVLEKQNTSLASKLRE 151
69**************************************************************************************99986 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 237 aa Download sequence |
MKRFGHSESL DSFISIFSPK EQPSSTTAGG YSKEFQAMLD SLEEEENSED GGGGGPAPER 60 KRRLRLDQVK ALERHFEVEN KLEPDRKLKI AAELELEPRQ VTIWFQNRRA RWKTKQLERD 120 YGVLKVNYDA LKLDYDVLEK QNTSLASKLR ELREKVSRES EEMKIQREFT AIDNCSATSM 180 MNCFEISNQR EFMKATNEEQ SLFNAEETCN FCSVDQAPSL HWGTVEEQRR RSLEITI |
| Nucleic Localization Signal ? help Back to Top | |||
|---|---|---|---|
| No. | Start | End | Sequence |
| 1 | 59 | 64 | ERKRRL |
| 2 | 60 | 89 | RKRRLRLDQVKALERHFEVENKLEPDRKLK |
| 3 | 108 | 116 | RRARWKTKQ |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT5G65310.1 | 3e-47 | HD-ZIP family protein | ||||
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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