PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022156403.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

bHLH

Protein Properties

Length: 713aa MW: 76578 Da PI: 6.2968

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022156403.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	50.7	3.2e-16	476	522	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn ErrRRdriN+++ L+el+P++ K++Ka++L +A+eY+k Lq XP_022156403.1 476 VHNLSERRRRDRINEKMRALQELIPNC-----NKVDKASMLDEAIEYLKTLQ 522 6***********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 713 aa Download sequence
MPLSELYRVA RGKLDSTQDK NNTVSADLSL NPENDVFELV WDNGQISLQG QSSRTRKNSN 60 SNTLQSQCLP SHSPRDRHRD TGHFSNARMG KFGAIDSVVR DVIGTAPSPD VELTHDDDDD 120 DMVPWLNYPL DGHLQHEYSS DFLPELSGVT VNDLPSRNSV ASSIGRGSGG NQVNRDTHVN 180 SLRGASLEDG NISKLSSLDA STDRPQRSST NQLHSSASQQ SQTSIPHLRT KSASGRENTT 240 DKLVQDSLMG QSPQVPLVTS SSSSTMRQKL DPNPPSNSSN FINFSHFLRP AALLKSNLQN 300 HGVTGTVGLS SMRSMDKDCS AASSQPPEAS LIATRGSLRK ESNSFCKNAV VPSIDDNNPS 360 DAKPPEQLQA VKQPEVACLG DSSKNDDHPK QCLEVGATTG FPDGEKAAES VIAASVCSRN 420 SVEGASDDPT RNRKRKCHDT EDSEWHSDDV EEECNDVKRA NPARGTGSKR SRAAEVHNLS 480 ERRRRDRINE KMRALQELIP NCNKVDKASM LDEAIEYLKT LQLQVQIMSM GAGLFMPPMM 540 FPGGMQPMNA PHIYSPMGVG MGMGFGIGIP DMNGGSPGYP IVQVPHIQGT HFPSPSIPGQ 600 TVMHGMAGSN FQVLGIPSQG LPMPMPMPRG PIPPFSGRPF MTSSGMAVAP MENTGSAAAC 660 SSKDASQNIN SPMLPNGGTE TSITPAPRQA NEQASGVNDR AVNPTSKSDV IPN

Sequence ? help Back to Top

Protein Sequence Length: 713 aa Download sequence

MPLSELYRVA RGKLDSTQDK NNTVSADLSL NPENDVFELV WDNGQISLQG QSSRTRKNSN  60
SNTLQSQCLP SHSPRDRHRD TGHFSNARMG KFGAIDSVVR DVIGTAPSPD VELTHDDDDD  120
DMVPWLNYPL DGHLQHEYSS DFLPELSGVT VNDLPSRNSV ASSIGRGSGG NQVNRDTHVN  180
SLRGASLEDG NISKLSSLDA STDRPQRSST NQLHSSASQQ SQTSIPHLRT KSASGRENTT  240
DKLVQDSLMG QSPQVPLVTS SSSSTMRQKL DPNPPSNSSN FINFSHFLRP AALLKSNLQN  300
HGVTGTVGLS SMRSMDKDCS AASSQPPEAS LIATRGSLRK ESNSFCKNAV VPSIDDNNPS  360
DAKPPEQLQA VKQPEVACLG DSSKNDDHPK QCLEVGATTG FPDGEKAAES VIAASVCSRN  420
SVEGASDDPT RNRKRKCHDT EDSEWHSDDV EEECNDVKRA NPARGTGSKR SRAAEVHNLS  480
ERRRRDRINE KMRALQELIP NCNKVDKASM LDEAIEYLKT LQLQVQIMSM GAGLFMPPMM  540
FPGGMQPMNA PHIYSPMGVG MGMGFGIGIP DMNGGSPGYP IVQVPHIQGT HFPSPSIPGQ  600
TVMHGMAGSN FQVLGIPSQG LPMPMPMPRG PIPPFSGRPF MTSSGMAVAP MENTGSAAAC  660
SSKDASQNIN SPMLPNGGTE TSITPAPRQA NEQASGVNDR AVNPTSKSDV IPN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	481	486	ERRRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09530.2	8e-60	bHLH family protein