PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022155901.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family GATA
Protein Properties Length: 274aa    MW: 30454 Da    PI: 7.5305
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022155901.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA54.91.2e-17194228135
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     Cs+C++  Tp+WR gp g+ktLCnaCG++y++ +l
  XP_022155901.1 194 CSHCQAQRTPQWRGGPLGPKTLCNACGVRYKSGRL 228
                     *******************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 274 aa     Download sequence    
MVSVTSEFEQ DDCSNLGAFQ FTSDLDDDDL CLSQTTKEVD VSLEWLSAFV EECLSTKGSS  60
LPLPTPSTRV NNPPSVPSSN SPLTNFSTVL GKARSKRRRR VAPKMSIHHL IGRRLRHSLQ  120
STTSTSSSDS DSDSDPLLLQ QTYWLAESEL LLPHKAAGEE EEERKKAVVD MDMDERDTTI  180
KTLKMEGGGS GRRCSHCQAQ RTPQWRGGPL GPKTLCNACG VRYKSGRLHP EYRPANSPTF  240
VSFLHSNSHK RVMEMRMMNT SSSSSTSTTY HYST
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
196101KRRRRV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24050.11e-34GATA family protein