PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022155793.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

bHLH

Protein Properties

Length: 513aa MW: 56156.4 Da PI: 5.2284

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022155793.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	45	2e-14	313	359	3	54
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h + Er+RR ++N+++ Lr+l+P++ +K + a+i+ A+eYIk+L XP_022155793.1 313 TKHFATERQRRVQLNDKYKALRSLVPNP-----TKTDRASIVGDAIEYIKEL 359 78************************.....9**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 513 aa Download sequence
MYEETGCSDP NSMSAEAVRE VSENGFPQTM VHIAALPSFP PPLIAGGSQE NDAGFEENLN 60 LSMEELSYHH RGGGGGDAME LEFQQQSAAA VGFDNSTHDG GINIINPNFA QDQGTGDSNR 120 MVCFDQSNWV GNQIQEMGLG FNHHHHQIQS QEQQQFPDSA MAAYSTQAPD LLNFFNLPAA 180 RCSNSSPVLP NSSISFSNLH SSAMGGFLTD LPAGGVDSGN PSSTSLSILY DPLFHLNLPP 240 QPPLFRELFH SLPHGYGLPA ASSRGRGGSL FPEGEMEREG TAGVYEDGDG SGVLEFTRDM 300 ADCMGKGRDG KMTKHFATER QRRVQLNDKY KALRSLVPNP TKTDRASIVG DAIEYIKELL 360 RTVKELKLLV EKKRCSRERS KRHRTTAEEE GGGAWDVESS NGKAVAAEAA GAEDQSYNLR 420 SSWLQRKTKD TEVDVRIIDD EVTIKLVQRK LNCLLIVSKL LDDLHLDLHH VAGGHIGDYY 480 SFLFNTKIYE GSSVYASAIA SKVIEAVDRH PHQ

Sequence ? help Back to Top

Protein Sequence Length: 513 aa Download sequence

MYEETGCSDP NSMSAEAVRE VSENGFPQTM VHIAALPSFP PPLIAGGSQE NDAGFEENLN  60
LSMEELSYHH RGGGGGDAME LEFQQQSAAA VGFDNSTHDG GINIINPNFA QDQGTGDSNR  120
MVCFDQSNWV GNQIQEMGLG FNHHHHQIQS QEQQQFPDSA MAAYSTQAPD LLNFFNLPAA  180
RCSNSSPVLP NSSISFSNLH SSAMGGFLTD LPAGGVDSGN PSSTSLSILY DPLFHLNLPP  240
QPPLFRELFH SLPHGYGLPA ASSRGRGGSL FPEGEMEREG TAGVYEDGDG SGVLEFTRDM  300
ADCMGKGRDG KMTKHFATER QRRVQLNDKY KALRSLVPNP TKTDRASIVG DAIEYIKELL  360
RTVKELKLLV EKKRCSRERS KRHRTTAEEE GGGAWDVESS NGKAVAAEAA GAEDQSYNLR  420
SSWLQRKTKD TEVDVRIIDD EVTIKLVQRK LNCLLIVSKL LDDLHLDLHH VAGGHIGDYY  480
SFLFNTKIYE GSSVYASAIA SKVIEAVDRH PHQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G06170.2	4e-50	bHLH family protein