PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022155589.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

bHLH

Protein Properties

Length: 615aa MW: 68314.3 Da PI: 7.1367

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022155589.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	23.4	1.1e-07	426	461	15	55
HHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 15 riNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 ++ ++f+ Lr++lP a +K++K++iL +veY+k+L+ XP_022155589.1 426 NLHHKFFILRSILPFA-----TKMDKVSILGDTVEYLKQLR 461 67789*********.....9***************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 615 aa Download sequence
MEEKGMEGLE LKGKLQLAAQ SVEWSYCVVW RLCTERGALV WGDGFYNGPI KTTKTLHSTP 60 TPTPSPSPSP SDLHALRTHQ LRDLYHSLST GTPSPSAALS PEDLTHLEWF YLLCISFSFP 120 PGIGLPGNAF SNNEHVWITA ANQIHTKIFS RALLAKSARI KTVVCIPLMD AVVELGTTNK 180 VKEDIGFVQH IKSIFAETQS VAPKPAVALS ELSTSNSAST SLEHYCCNII RRQEDDSPSS 240 VGVGEPSKSM QLELSEHIPL GSASPDNDXS NNTYFDAHFH PLPNSGHLLN NFDFEYRPPL 300 KHPPPPAAMA MLTEEDTRYS STVSAILQNQ NQSISSAANL TCSIQSAFSE WNRRSDVHHV 360 PLESTSTCTS QCLLKHILHI VPFLHAKHHH HQNPSKSCDG RWQKGTSQDQ LSGNHFLAET 420 LCHPENLHHK FFILRSILPF ATKMDKVSIL GDTVEYLKQL RQKIQDLEAQ NRELEITKRS 480 GFEQLQRNAA AYQTRYDQPC SDKRKLRILE GVGDGCIKHK VLNSPTSLDS NLQVSIIGSE 540 GLLELHCPYK EGLLLDILLI LQGLRIETTT VCSTLSHGVF IAELRAKVKE NADGKKASIL 600 EVKRAIQQII PRTEN

Sequence ? help Back to Top

Protein Sequence Length: 615 aa Download sequence

MEEKGMEGLE LKGKLQLAAQ SVEWSYCVVW RLCTERGALV WGDGFYNGPI KTTKTLHSTP  60
TPTPSPSPSP SDLHALRTHQ LRDLYHSLST GTPSPSAALS PEDLTHLEWF YLLCISFSFP  120
PGIGLPGNAF SNNEHVWITA ANQIHTKIFS RALLAKSARI KTVVCIPLMD AVVELGTTNK  180
VKEDIGFVQH IKSIFAETQS VAPKPAVALS ELSTSNSAST SLEHYCCNII RRQEDDSPSS  240
VGVGEPSKSM QLELSEHIPL GSASPDNDXS NNTYFDAHFH PLPNSGHLLN NFDFEYRPPL  300
KHPPPPAAMA MLTEEDTRYS STVSAILQNQ NQSISSAANL TCSIQSAFSE WNRRSDVHHV  360
PLESTSTCTS QCLLKHILHI VPFLHAKHHH HQNPSKSCDG RWQKGTSQDQ LSGNHFLAET  420
LCHPENLHHK FFILRSILPF ATKMDKVSIL GDTVEYLKQL RQKIQDLEAQ NRELEITKRS  480
GFEQLQRNAA AYQTRYDQPC SDKRKLRILE GVGDGCIKHK VLNSPTSLDS NLQVSIIGSE  540
GLLELHCPYK EGLLLDILLI LQGLRIETTT VCSTLSHGVF IAELRAKVKE NADGKKASIL  600
EVKRAIQQII PRTEN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G09820.1	4e-63	bHLH family protein