PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022155558.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family bHLH
Protein Properties Length: 308aa    MW: 34167.4 Da    PI: 6.5115
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022155558.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.24e-10191232955
                     HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +r+RR ri +++e L+ellP++      K + a++L  +++++k+Lq
  XP_022155558.1 191 DRQRRIRIAERLEALQELLPQS-----SKGNQASVLDDVIDHVKHLQ 232
                     7********************8.....6******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    
MVVLDFTFAQ RSNSVFPPTF SWFNQMSILV SFFCVVRSHD PGKMEGQNGC NNSVQILSVK  60
LGANVNIVSR VPGDCTNHHH VLPADRSVNQ TNFPLLTEWT QNVKTTPTFV EFIAETSNFS  120
RKASTKEMLA NVPFSTIEAV DGVSEIHGEF SYNHPTGSDS SKPTDSRKNK APGILSKPRS  180
SSSSRRGYST DRQRRIRIAE RLEALQELLP QSSKGNQASV LDDVIDHVKH LQLQIKDLSQ  240
SKLGGESSSE PFRFVEGYGH YMSHQEMQGE PLEEMVGKLL EVDPSAAAQL LENKGLFLMP  300
MDFAEGSC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G30980.17e-25bHLH family protein