PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022155526.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

GATA

Protein Properties

Length: 540aa MW: 60054.1 Da PI: 6.9773

Description

GATA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022155526.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GATA	49.8	4.5e-16	7	41	1	35
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C +Cg+t+TplWR+gp ++ LCnaCG ++r kg+ XP_022155526.1 7 CYHCGVTSTPLWRNGPPDKPVLCNACGSRWRTKGT 41 **************55555*********997 PP

Sequence ? help Back to Top
Protein Sequence Length: 540 aa Download sequence
MGKQGPCYHC GVTSTPLWRN GPPDKPVLCN ACGSRWRTKG TLANYTPLHA RADPDEYDDK 60 RISRLKNLSM FKIKEVKPLK RKQHPDSGVV VGVIPDHDQS FHKAVEEDTS NRSSSGSAIS 120 NSESCAQFGS ADASDLTGPS QSTAWETTVP SKKKRTCVSR SNPSAVEKLT KDLHSILHEQ 180 QSYFSGSSEE DLLFESEIPM VSVEIGHGSV LMRHPSSIAR EEESEASSLS VDNKQFSVNE 240 AYSESSILPV RGETENKMIN LSTLGIGRKH PNGQGFIQEQ IKRDKPHSEK MQALGNHNSP 300 LCNIDLTDIL NFREFTQHLT SEDQQALMKY LPSVDTEELP DSLNSMFDSP QFKENLNSFK 360 QLLTEGVFDF SFRSARREDC KTLSRLVLRD LSKSKWVERY HLLKKCSSGE PVQGFAAASS 420 SFMNSKRLLD GQNKKFSETK TTMKSPKRVM TKTSTESKEL VDSDGSCFSP RSLFTLPSDG 480 GSFTLESLHF DGESSDQDLL LDVRSNSSFP QAELLHPTLS FGAQQASNSS SSVNFRLMHR

Sequence ? help Back to Top

Protein Sequence Length: 540 aa Download sequence

MGKQGPCYHC GVTSTPLWRN GPPDKPVLCN ACGSRWRTKG TLANYTPLHA RADPDEYDDK  60
RISRLKNLSM FKIKEVKPLK RKQHPDSGVV VGVIPDHDQS FHKAVEEDTS NRSSSGSAIS  120
NSESCAQFGS ADASDLTGPS QSTAWETTVP SKKKRTCVSR SNPSAVEKLT KDLHSILHEQ  180
QSYFSGSSEE DLLFESEIPM VSVEIGHGSV LMRHPSSIAR EEESEASSLS VDNKQFSVNE  240
AYSESSILPV RGETENKMIN LSTLGIGRKH PNGQGFIQEQ IKRDKPHSEK MQALGNHNSP  300
LCNIDLTDIL NFREFTQHLT SEDQQALMKY LPSVDTEELP DSLNSMFDSP QFKENLNSFK  360
QLLTEGVFDF SFRSARREDC KTLSRLVLRD LSKSKWVERY HLLKKCSSGE PVQGFAAASS  420
SFMNSKRLLD GQNKKFSETK TTMKSPKRVM TKTSTESKEL VDSDGSCFSP RSLFTLPSDG  480
GSFTLESLHF DGESSDQDLL LDVRSNSSFP QAELLHPTLS FGAQQASNSS SSVNFRLMHR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G17570.3	1e-149	GATA family protein