PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022155487.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family C3H
Protein Properties Length: 430aa    MW: 46544.7 Da    PI: 7.6918
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022155487.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH29.81e-09106128326
                     S---SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH   3 telCrffartGtCkyGdrCkFaHg 26 
                     ++lC+f+ + GtC+yGd+C++ H+
  XP_022155487.1 106 EKLCNFWVQ-GTCSYGDKCRYLHS 128
                     579******.*************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 430 aa     Download sequence    
MDVDGGNKRV FQRLGAPSGD ARNQKVCFHW RAGKCNRHPC HFLHRELNGP PHAASNGAAA  60
AAPKRGHGFA SDDSSVSAPR RSTNFSGGST WGRVHGGGNR VVRKTEKLCN FWVQGTCSYG  120
DKCRYLHSWS LGESFSHLTQ LDGHQKAVTG IAFPSGSDKL YTGSKDETVR VWDCQSGQCM  180
AVINLGGEVG SMIAEGPWVF VGIPHLVKAW NIQTSADLSL SGPVGLVYAL VVGNDLLFAG  240
TQDGSILAWK FNVATNSFEP AASLNGHTLP VVSLVVGANR LYSGSMDHSI KVWSLESLQC  300
LQTLTDHTSV VMSVLCWEQF LLSCSLDKTI KVWAATESGN LEVTYTHKED HGLLTLCGMH  360
DLDGKPVLLC SCNDNSVRLF DLPSFSERGK IFSKEEIRSI QAGPGGIFFT GDGTGLMKVW  420
KWLAEQPASM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51980.10.0C3H family protein