PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022155206.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

C2H2

Protein Properties

Length: 290aa MW: 32474.2 Da PI: 7.5285

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022155206.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.6	2.3e-05	103	122	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++C+ C+k+F+r n++ H+ XP_022155206.1 103 FSCTVCSKTFNRYNNMQMHM 122 89*****************9 PP
2	zf-C2H2	16.1	3.1e-05	188	210	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C +Cgk+F + + ++H +++ XP_022155206.1 188 FSCRKCGKPFAVRGDWRTHEKNC 210 89*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 290 aa Download sequence
MQSSNFTCIS SSESACLEPD EEGEDSIFLS LCPPGQRHAS ISSKYQKHPQ NNPTHGAAAV 60 TVAMHIGPPL AAAADSTDGA ARPVDGQYWI PTPAQILVGP TQFSCTVCSK TFNRYNNMQM 120 HMWGHGSQYR KGPESLRGSK PASSMLRLPC YCCAEGCRNN IEHPRSRPLK DFRTLQTHYK 180 RKHGAKPFSC RKCGKPFAVR GDWRTHEKNC GKLWFCICGS DFKHKRSLKD HVRAFGDGHA 240 PHTVQVCEVD DDDEDDVDDD WDIDKNNNDN NDILHHHQRV NGGQGWSIFH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G13290.1	1e-117	C2H2 family protein