PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022154996.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family HD-ZIP
Protein Properties Length: 742aa    MW: 82307.1 Da    PI: 6.3503
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022154996.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox61.51.3e-1982137156
                     TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     ++++ ++t+eq++e+e lF+++++p++++r +L++klgL+ +q+k+WFqNrR++ k
  XP_022154996.1  82 KKRKNRHTSEQIREMEMLFKESPHPDEKQRLQLSEKLGLSSKQIKFWFQNRRTQIK 137
                     567788**********************************************9877 PP
2START200.28.8e-632604801205
                     HHHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS....SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEEEE CS
           START   1 elaeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv...dsgealrasgvvdmvlallveellddkeqWdetla....kaetlev 84 
                     e+a +a++elvk+a+++ep+Wv+s+    e +n+d+++++f+ ++    +++ea+r+sgvv+ +l++lv++++d+  qW+e+++    ka+t+ev
  XP_022154996.1 260 EIAKRATDELVKMADSGEPLWVRSVetgrELLNYDVYMKEFAADNErpkREIEASRESGVVFVDLHRLVQSFMDVV-QWKEMFPsiisKATTMEV 353
                     57899***********************99***********998889*****************************.****************** PP

                     ECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE- CS
           START  85 issg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehvdl 172
                     +s+g      ga+qlm+aelq+l+p+ p R+++f+R++ q + ++wv++dvSvd   +    ss+  ++++pSg++i+++s+gh+k+twveh+++
  XP_022154996.1 354 VSNGdgaarnGAVQLMFAELQMLTPALPsREVYFIRSCTQVSPDKWVVADVSVDKVGDGID-SSSSVSRKRPSGCIIQDTSDGHCKITWVEHWEC 447
                     **********************************************************986.4444446************************** PP

                     -SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXX CS
           START 173 kgrlphwllrslvksglaegaktwvatlqrqce 205
                     ++   + ++r +++sgl++gak+w+a lq +ce
  XP_022154996.1 448 QKMGLRTIYRTIINSGLIFGAKHWMASLQTHCE 480
                     ********************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 742 aa     Download sequence    
MAVVMSGNHP PRRLNNAPSS PALSLTLAGV FGNAAAEDLE VDAPARRDDS CSDNSEPAGS  60
RSAEDLGADQ DDEDEDKQGN RKKRKNRHTS EQIREMEMLF KESPHPDEKQ RLQLSEKLGL  120
SSKQIKFWFQ NRRTQIKAIH ERHENALLKG EMEKMRDENQ AMREIISKGS CPKCGSSSAN  180
SSAVSRETIF TTISEQQQLR TEITRLKAEV ETLRVALAKY APPGTCTSRS TENEEGILER  240
RRSLEQSKTI FGLEKARVME IAKRATDELV KMADSGEPLW VRSVETGREL LNYDVYMKEF  300
AADNERPKRE IEASRESGVV FVDLHRLVQS FMDVVQWKEM FPSIISKATT MEVVSNGDGA  360
ARNGAVQLMF AELQMLTPAL PSREVYFIRS CTQVSPDKWV VADVSVDKVG DGIDSSSSVS  420
RKRPSGCIIQ DTSDGHCKIT WVEHWECQKM GLRTIYRTII NSGLIFGAKH WMASLQTHCE  480
WQVFFMATNV PMKDSTGITT LGGRKSVLRL AQRMTSSFYQ AFGASISHSW PKVPTKTGEN  540
IRVASRKNLN DPREPLGLIL CAVASVWLPV SPKVLFEFLI DEARRLEWDV MSGGGSAETI  600
TNFAKGQNRG NAVTIQAIKS DETNVWVLQD SLTNEYESMV VYAQVDITSM KSVMAGCDPG  660
NITTLPTGFS ILPDGHQSRP MVISSSKEEK GAEGGSLLTM ASQILASASQ TAEMTAQSVE  720
YVNNVISHTL KNIKASLQGE DD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G79840.10.0HD-ZIP family protein