PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022154984.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family GRAS
Protein Properties Length: 543aa    MW: 60837 Da    PI: 5.7316
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022154984.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS423.81.4e-1291745422373
            GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 
                     +e L +cA+a+ ++d+   ++l+++l+ ++s  g+p+qRl ay++eAL ar a+s+s++ykal+++e      +e l+++++++ev+P++kf++l
  XP_022154984.1 174 KEMLCACARAIGDNDMLTGEWLVSELRGMVSVFGKPIQRLGAYMLEALVARTASSGSSIYKALRCKEPI---GAELLSYMHILYEVCPYFKFGYL 265
                     789*****************************************************************9...9********************** PP

            GRAS  97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledl 189
                       N aI ea++ge+rvHiiDf+i qG QW++L+qaLa+Rp+gpp++ iTg+++++s   +   l  +g+rL+ +Ae+l vpfef+  +a +++++
  XP_022154984.1 266 SGNGAIAEAIKGENRVHIIDFQIAQGNQWITLIQALANRPRGPPKITITGIDDSASAfaRGGGLDIVGKRLSLLAESLMVPFEFHG-IAASVSEV 359
                     *****************************************************88889999*************************.7999**** PP

            GRAS 190 eleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerik 284
                     + e+L+v+pgEa+aVn++l lh+++de+v ++++rd++L+lvk+lsPkvv++ve+e+++n+++F  rf+++l+yy+a+f+s++++l+re++eri+
  XP_022154984.1 360 QREDLKVQPGEAIAVNFALVLHHIPDETVGSQNHRDRILRLVKGLSPKVVTLVEHESNTNTAPFYPRFVQTLKYYTAIFESIDVTLSREHKERIN 454
                     *********************************************************************************************** PP

            GRAS 285 vErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                     vE+++l+r+ivn++acegaer+erhe lekWr+r+ +aGFkp pls ++++++++ll+++ +  y++ee++g+l+lgW +++Lv+ SaW
  XP_022154984.1 455 VEQHCLARDIVNIIACEGAERVERHELLEKWRSRFLTAGFKPHPLSPFVNATIEALLKNYCD-KYTLEEKDGALYLGWLNQNLVTSSAW 542
                     ************************************************************95.5************************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 543 aa     Download sequence    
MQEPSRKKVP TQTHRLYEQP QQEPGSYYWP PMNHQGLYSD DVFEQNRLPS EAFKQYCNLE  60
SSSGTSTYPP QNSSSTASFA SNGSPSSHQE CLSYPLDPYY SPDNNCGSPV SRSCLTDDAI  120
DNLRHKIREL ETAMLGPDED LDIYSITNPV HPELPVPEVE WKDVSEIITR KDLKEMLCAC  180
ARAIGDNDML TGEWLVSELR GMVSVFGKPI QRLGAYMLEA LVARTASSGS SIYKALRCKE  240
PIGAELLSYM HILYEVCPYF KFGYLSGNGA IAEAIKGENR VHIIDFQIAQ GNQWITLIQA  300
LANRPRGPPK ITITGIDDSA SAFARGGGLD IVGKRLSLLA ESLMVPFEFH GIAASVSEVQ  360
REDLKVQPGE AIAVNFALVL HHIPDETVGS QNHRDRILRL VKGLSPKVVT LVEHESNTNT  420
APFYPRFVQT LKYYTAIFES IDVTLSREHK ERINVEQHCL ARDIVNIIAC EGAERVERHE  480
LLEKWRSRFL TAGFKPHPLS PFVNATIEAL LKNYCDKYTL EEKDGALYLG WLNQNLVTSS  540
AWI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48150.10.0GRAS family protein