PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022154955.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family bHLH
Protein Properties Length: 234aa    MW: 25679.3 Da    PI: 7.1978
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022154955.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.76.6e-1179126454
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     ++  rE+ RRdr+N++f eL  +l +    + +K +Ka+iL  Av+ + +L
  XP_022154955.1  79 SKACREKLRRDRLNDKFLELGAILEPG---RPPKTDKAAILIDAVRIVTQL 126
                     6789**********************8...89*************999888 PP
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    
MVSPETTNWL FDYALMDDIP VTDGNFSGAS TGFSWSMPAL NGSSNVSAEN EGSLLDSDCL  60
KEPGSKKRVR TESSCASSSK ACREKLRRDR LNDKFLELGA ILEPGRPPKT DKAAILIDAV  120
RIVTQLRGEA QMLKDSNTSL SEKIKELKAE KNELRDEKQR LKMEKEKLEQ QLKSMNSQPG  180
FLPPAIPATF AAQGQAPGNK LVPFIGYPGV AMWQFMPPAA VDTSQDHVLR PPVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.13e-99bHLH family protein