PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_022154799.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
|
||||||||
Family | C2H2 | ||||||||
Protein Properties | Length: 246aa MW: 27542.2 Da PI: 8.7895 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 12.5 | 0.00044 | 150 | 171 | 2 | 23 |
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 kC++C k F++ L +H + + XP_022154799.1 150 KCEKCRKQFRSYKALFSHEKIC 171 7*****************9987 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 246 aa Download sequence |
MGFAPSSSSY SSSADEKPAL YELRENPKRS LRFADPVFAF SHSEILVQDR ESETESKNPT 60 RKRSKRSPTP AAVDSPANSV SDTSPEEDVA MCLMMLSRDS WVGNEDQVQD RKPNGIPESE 120 SEPKSKSKSK SMEELGRNLK VMKLIRRKKK CEKCRKQFRS YKALFSHEKI CRPETELESG 180 RIFKCPFCLK LFGSGQALGG HKRSHLATST NGTVNVSVSL RLEISLIDLN LPAPVEEDDY 240 SVVSYA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G60580.1 | 7e-28 | C2H2 family protein |