PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022154686.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

GRF

Protein Properties

Length: 370aa MW: 42152.5 Da PI: 8.1719

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022154686.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	77.8	1e-24	77	120	1	44
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+epgrCrRtDGKkWRCs+++++++k+CErH+hrg++rsrk++e XP_022154686.1 77 DPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVE 120 79***************************************987 PP
2	QLQ	57.7	3.5e-20	9	43	2	36
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiq 36 +FTaaQ+q+L++Q+l++Ky++++ PvPp+Ll i+ XP_022154686.1 9 PFTAAQWQELEHQALIFKYMVSGIPVPPDLLYTIK 43 8*****************************97765 PP

Sequence ? help Back to Top
Protein Sequence Length: 370 aa Download sequence
MSGRSSRFPF TAAQWQELEH QALIFKYMVS GIPVPPDLLY TIKRSSLDSP FISRLFPQHY 60 PDVGWNYLQM GSGRKIDPEP GRCRRTDGKK WRCSKEAYPD SKYCERHMHR GKNRSRKPVE 120 VLKTTTTTTP TTPATALNSN PSTPAISSIT QNSALSSLPS DPHNHNHSCF NTHSPHPFLY 180 QHGSSSSRPP GSALHQNSNT SMLFDNPDYR RNRYVYGLKE DGDEHPFLSE EHSGNMRGFS 240 ASSLEDSWQL TPLTMSCSSS SSRHKNCSAL QGDYSSYLQL QSFGDSPKQL KQEEHYYEMQ 300 NKMGREEPQK IMHHFFDEWS PKDRESWLDL DDKSSNTGSV SATRLSMSIS NNSLQHDFSS 360 IFNSNKHNEN

Sequence ? help Back to Top

Protein Sequence Length: 370 aa Download sequence

MSGRSSRFPF TAAQWQELEH QALIFKYMVS GIPVPPDLLY TIKRSSLDSP FISRLFPQHY  60
PDVGWNYLQM GSGRKIDPEP GRCRRTDGKK WRCSKEAYPD SKYCERHMHR GKNRSRKPVE  120
VLKTTTTTTP TTPATALNSN PSTPAISSIT QNSALSSLPS DPHNHNHSCF NTHSPHPFLY  180
QHGSSSSRPP GSALHQNSNT SMLFDNPDYR RNRYVYGLKE DGDEHPFLSE EHSGNMRGFS  240
ASSLEDSWQL TPLTMSCSSS SSRHKNCSAL QGDYSSYLQL QSFGDSPKQL KQEEHYYEMQ  300
NKMGREEPQK IMHHFFDEWS PKDRESWLDL DDKSSNTGSV SATRLSMSIS NNSLQHDFSS  360
IFNSNKHNEN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	1e-54	GRF family protein