PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022154673.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family NF-YA
Protein Properties Length: 351aa    MW: 39021.6 Da    PI: 8.2196
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022154673.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA1011.1e-31195251158
       CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     d p+YVNaKQy++Il+RRq+Rakle+++k+ +++rkpylheSRh hAl+R RgsgGrF
  XP_022154673.1 195 DGPIYVNAKQYHGILRRRQSRAKLEAQNKV-IRNRKPYLHESRHIHALNRVRGSGGRF 251
                     57****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 351 aa     Download sequence    
MNMMAIPLEN FAPKNLDQNS VHSAFLFNVD CTPWWNSNER KIPVALSDNI TLKLETPAQP  60
YHKQLGLELQ DQESSTAHST GQSLHKVCPM EAQNTQEQCV SSESGQDENC GESVENQMKS  120
VILLSNPEFM FNSPQVDGCP SSMARVSYPY IDPYYGGLLY GGYCQQAIHN QAQVSSNVVG  180
IAPARVPLPH GLAEDGPIYV NAKQYHGILR RRQSRAKLEA QNKVIRNRKP YLHESRHIHA  240
LNRVRGSGGR FLSAKKNQPP DPNRITLPTT LRQKKDTPDF NNCSSETGDR DHSIMTATCS  300
DISSISNGSV RFGQPNNRFS TISSNMGGRM EQYRGGVFVQ GETRSHSSIV Q
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G54160.14e-39NF-YA family protein