PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022154371.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family GRAS
Protein Properties Length: 471aa    MW: 52904.8 Da    PI: 6.3807
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022154371.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS473.11.5e-144464681374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l++lLl+cA++v+ g+l  a+ +L ++s+las +gd+mqR+aayf+eALa r+++++++lyka+++++ +   +see+ + klf+e++P+lk+++
  XP_022154371.1  46 LIHLLLTCANHVAVGSLDSANLALDQISHLASANGDTMQRIAAYFAEALADRILKTWPGLYKAFNSTKMP--MVSEEIIVKKLFFEMFPFLKVAF 138
                     689*************************************************************999998..69********************* PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledle 190
                     +++NqaI+ea+ege+++HiiD+++++ +QW+aLlq L++Rpegpp+lRiTgv++    +ke l ++++rL++ Ae+l++pf+fn  v++rle+l+
  XP_022154371.1 139 VLTNQAIVEAMEGEKMIHIIDLNANETAQWLALLQVLSARPEGPPHLRITGVHP----QKEVLDQMARRLTEEAEKLDIPFQFNS-VVSRLENLD 228
                     ******************************************************....9**************************.7******** PP

            GRAS 191 leeLrvkpgEalaVnlvlqlhrll........................................................desvsleserdevLk 229
                     +e+Lrvk+gEala+n+vlqlh ll                                                        + s++   ++d++L+
  XP_022154371.1 229 MEKLRVKTGEALAINSVLQLHALLaydnevpqkpspsaskgangvqysryphlnqttlsellekdlvngcspssdsvsssALSQANVTKIDSFLN 323
                     ***************************************************************************9996633333333799**** PP

            GRAS 230 lvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGF 324
                      +++l Pkv+vv+eq+++hn+++++er+leal++y+a+fd+le++++r+s er k+E++l+g+ei+n+vacegaer+erhe+ ekW++rl+ aGF
  XP_022154371.1 324 GLWGLTPKVMVVTEQDSNHNGSTLMERLLEALHTYAAVFDCLESNMSRTSLERLKLEKMLFGEEIKNIVACEGAERKERHEKREKWSQRLDLAGF 418
                     *********************************************************************************************** PP

            GRAS 325 kpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     + v+ls++ + qa++ll+ ++ dgyr++ee+g+++++W+drpL+svSaWr
  XP_022154371.1 419 RHVSLSYYGMLQARSLLQGYGCDGYRMKEENGCVMICWQDRPLFSVSAWR 468
                     *************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 471 aa     Download sequence    
MFQDEGTSSV TSSPLQFFTM MSLSPKLGSP YPWLRELKSE ERGLYLIHLL LTCANHVAVG  60
SLDSANLALD QISHLASANG DTMQRIAAYF AEALADRILK TWPGLYKAFN STKMPMVSEE  120
IIVKKLFFEM FPFLKVAFVL TNQAIVEAME GEKMIHIIDL NANETAQWLA LLQVLSARPE  180
GPPHLRITGV HPQKEVLDQM ARRLTEEAEK LDIPFQFNSV VSRLENLDME KLRVKTGEAL  240
AINSVLQLHA LLAYDNEVPQ KPSPSASKGA NGVQYSRYPH LNQTTLSELL EKDLVNGCSP  300
SSDSVSSSAL SQANVTKIDS FLNGLWGLTP KVMVVTEQDS NHNGSTLMER LLEALHTYAA  360
VFDCLESNMS RTSLERLKLE KMLFGEEIKN IVACEGAERK ERHEKREKWS QRLDLAGFRH  420
VSLSYYGMLQ ARSLLQGYGC DGYRMKEENG CVMICWQDRP LFSVSAWRCC K
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50420.10.0GRAS family protein