PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022154271.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

C2H2

Protein Properties

Length: 268aa MW: 30488.9 Da PI: 6.5548

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022154271.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17	1.7e-05	102	121	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++Cp C k+F+r n++ H+ XP_022154271.1 102 FSCPVCYKTFNRYNNMQMHM 121 89*****************9 PP
2	zf-C2H2	15	7.1e-05	186	208	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C +Cgk F + + ++H +++ XP_022154271.1 186 FMCRKCGKAFAVRGDWRTHEKNC 208 89*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 268 aa Download sequence
MDIDKEANDD VSNNSVTVAL HIGLPSPSAS EMASLLLSSQ PHVDQEDEDE LEDEDEDEEL 60 EDHQQQQQQQ QNQLSGFSLS RLNKGQYWIP TPSQILIGPT QFSCPVCYKT FNRYNNMQMH 120 MWGHGSQYRR GPESLRGTQP TGMLRLPCYC CSPGCRNNID HPRAKPLKDF RTLQTHYKRK 180 HGIKPFMCRK CGKAFAVRGD WRTHEKNCGK LWYCICGSDF KHKRSLKDHI KAFGHGHAAY 240 TAAAAAAGDR HHGFELEDDE PASEVEQD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57670.1	1e-116	C2H2 family protein