PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022154109.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

C3H

Protein Properties

Length: 312aa MW: 33102.5 Da PI: 9.4611

Description

C3H family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022154109.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-CCCH	25	3.3e-08	102	127	2	27
-S---SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 2 ktelCrffartGtCkyGdrCkFaHgp 27 kt+lC+ f C++Gd+C+FaHg+ XP_022154109.1 102 KTRLCNKFNSAEGCRFGDKCHFAHGE 127 8***********************96 PP
2	zf-CCCH	30.5	6e-10	279	304	1	27
--S---SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 1 yktelCrffartGtCkyGdrCkFaHgp 27 +kt+lC +fa+ GtC + +rC+FaHg+ XP_022154109.1 279 FKTKLCANFAK-GTCTFRERCHFAHGE 304 69*******.***********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 312 aa Download sequence
MELDGVRKRE RTETTLNGNG GFKKSKPEMD SLSTGLGSKS RPCTKFFSTS GCPFGEGCHF 60 AHYVPGGFKA ISQMISPAIP PGIRNPVGPP SFPDGVNPPA VKTRLCNKFN SAEGCRFGDK 120 CHFAHGEWEL GRPAAPSVAD HGGMGLPMQH PPRMGGGWNM PPPPPPSHGP AASFGASATA 180 KISVDASLAG PIIGKNGVNS KNICRMTGAK LSIKEHESDP SLKNIELEGT FDQINLASSM 240 VRELIANVGA ASANNAMKQQ QQQHHSANQQ QSSGSANNFK TKLCANFAKG TCTFRERCHF 300 AHGESELRKP GI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06770.1	1e-46	C3H family protein