PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022154097.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family bHLH
Protein Properties Length: 424aa    MW: 46410.2 Da    PI: 7.9502
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022154097.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH383e-12358403655
                     HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +++Er RR +i +++ +L+el+P+     +k  + +++L +AveYIk Lq
  XP_022154097.1 358 SIAERVRRTKISERMRKLQELVPNM----DKQTNTSDMLDLAVEYIKGLQ 403
                     689*********************7....688*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 424 aa     Download sequence    
MEADFQQQHL QPQMNSGLTR YRSAPSSYFR RLADREFCDQ FFNQPSSPET ERTGGGGGGG  60
GGGVLEESSP NLREAQKNAP AGEVFVTTEA NQQTTYVSHE TRGIHQQPSN VNNNYPSASS  120
TPSFYQNSMK PPLPNQGMIP GTDGSGSMGV DLKPRIRTDG GRASNLIRQS SSPAGLFDHI  180
NISESGYAAL RGKGNFGTGS SFNEEASLSS PSRLKNFSPR TIPPHSSGLM SSPMAGIEKR  240
SIRENNPDSK GFADSHASDY GSTSYPVGSW DESAMSDNIV GRKVLEDNDD DEKSYSNFNL  300
SVDTQKVDPG NRPPLLSHHL SMPNTSAEMN AIEKILQFSD SVPCKLRAKR GCATHPRSIA  360
ERVRRTKISE RMRKLQELVP NMDKQTNTSD MLDLAVEYIK GLQKQVQTLS DNRAKCKCSH  420
SQHQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51140.12e-68bHLH family protein