PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022153837.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family GATA
Protein Properties Length: 222aa    MW: 24909.5 Da    PI: 8.7414
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022153837.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA55.86.3e-18174208133
            GATA   1 Cs..nCgttkTplWRrgpdgnktLCnaCGlyyrkk 33 
                     C+  nC+t  Tp+WR+gp g+k+LCnaCG++yrk+
  XP_022153837.1 174 CTnyNCNTNFTPMWRKGPLGPKSLCNACGIRYRKE 208
                     55559****************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 222 aa     Download sequence    
MESQLWRRFL RSESQVDLTL RLGFPNGNGG HPDDHTDHNK PLFSPPLHHL RQTHQVAAVN  60
NNVGLESCGG MSEANYNPNQ ILWSKELKTY VLKSNNQTSL GSHDQVKGNI GIGNGSTTNN  120
LANVPLQTNS NDLYTLLNPA SRSTDDHEDE TSSGSRRKAS RLRRVSHDEP EKRCTNYNCN  180
TNFTPMWRKG PLGPKSLCNA CGIRYRKELM NREAMTAENS HN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20750.16e-17GATA family protein