PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022153582.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family HD-ZIP
Protein Properties Length: 692aa    MW: 77443.7 Da    PI: 6.64
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022153582.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox67.91.3e-21105160156
                     TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     r+k +++t+eq++e+e+lF+++++p++++r++L+k+lgL+ rqVk+WFqNrR++ k
  XP_022153582.1 105 RKKYHRHTAEQIREMEALFKESPHPDEKQRQQLSKRLGLSPRQVKFWFQNRRTQIK 160
                     7999************************************************9877 PP
2START213.86.3e-672795015206
                     HHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS.......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEEEEE CS
           START   5 eaaqelvkkalaeepgWvkss....esengdevlqkfeeskv......dsgealrasgvvdmvlallveellddkeqWdetla....kaetlevi 85 
                     +a++el ++a+a ep+W +s+    e++n+de+l++f  +++      +++ea+r+++vv+m++ +lv++++d + qW+e+++    ka+t++vi
  XP_022153582.1 279 QALEELKTMATAPEPLWHRSVetgrEILNYDEYLKTFHLTNSsnnwlkRHIEASRETTVVFMEPSRLVQSFMDEN-QWKEMFPfmisKAATVDVI 372
                     6789999******************************9888899*******************************.******************* PP

                     CTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE-- CS
           START  86 ssg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehvdlk 173
                     ++g      ga+qlm+ae q+l+plvp R+ +fvR+++ql a++w+ivdvS+++ ++++ ++ +v++++ pSg++i+++sngh+kvt+veh +l+
  XP_022153582.1 373 CNGevaywnGAVQLMFAEVQMLTPLVPtREMYFVRHCKQLDAERWAIVDVSIENVEDNNMDAALVKCRKCPSGCIIKDESNGHCKVTMVEHLELE 467
                     **********************************************************99*********************************** PP

                     SSXX.HHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
           START 174 grlp.hwllrslvksglaegaktwvatlqrqcek 206
                     +++  h+l+rs+v++g+a+ga++w+atlq qce+
  XP_022153582.1 468 KSTAvHNLYRSIVNNGTAFGARHWMATLQLQCER 501
                     99977***************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 692 aa     Download sequence    
MNPHLNLNLM AAVDMSNDNT NNRLAYTKDF FSSPALSLTL AGIFHRGEKT DVEMEEVDDS  60
VGRRDDVAEI SSENSGLVRS DEDFEGGGVH EEDEDGDQGC HVKKRKKYHR HTAEQIREME  120
ALFKESPHPD EKQRQQLSKR LGLSPRQVKF WFQNRRTQIK AIQERHENAL LKSEMDKLRE  180
ENKAMRKIAK NKAGCPNCGA TDVGSGDHTA LTTTEQLRIK NAKLKAEVER LRAALGKYPA  240
AAASPSYSTG NEQENRSCLD FYTGIFGLEK SRIMDKVNQA LEELKTMATA PEPLWHRSVE  300
TGREILNYDE YLKTFHLTNS SNNWLKRHIE ASRETTVVFM EPSRLVQSFM DENQWKEMFP  360
FMISKAATVD VICNGEVAYW NGAVQLMFAE VQMLTPLVPT REMYFVRHCK QLDAERWAIV  420
DVSIENVEDN NMDAALVKCR KCPSGCIIKD ESNGHCKVTM VEHLELEKST AVHNLYRSIV  480
NNGTAFGARH WMATLQLQCE RLAFSMATNI PIKDSIGVAT LAGRKSTLKL AQRMSWSFSQ  540
AVAASSYQTW SKVVGKTGED IRVCSRKNLS DPGEPIGVIL CAVSSLWLPV SPHLLFHFLR  600
DEARRNEWDA MFGGEKAQLI ANLAKGQDRG NAVTIQTIGA KESSSVWILQ DSSTNASESM  660
VVYSGVDVVG IQSVITGCDS GSVSILPSGF SI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1103107KKRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G79840.10.0HD-ZIP family protein