PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022153536.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family GeBP
Protein Properties Length: 262aa    MW: 29344.1 Da    PI: 9.5309
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022153536.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57372.29.6e-233762697
          DUF573 26 tgk..spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97
                    +g+  + ++d+  fy+++k++++++++k+qlveK+rrLKkK+++   k++sgk+++f++ hdq +fe+s+kiW 
  XP_022153536.1  3 RGTthHHQNDTALFYDQIKSKLQLDFNKNQLVEKLRRLKKKYRNVIGKISSGKDFNFKSLHDQATFEISRKIWS 76
                    555324445****************************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    
MQRGTTHHHQ NDTALFYDQI KSKLQLDFNK NQLVEKLRRL KKKYRNVIGK ISSGKDFNFK  60
SLHDQATFEI SRKIWSTTGR IGVDDNALDD DEPAPTLYPN YMDHRNEELI GNCAEKKPTP  120
TPKSRKRSRP GAGLRIDGPR ASNENLNKEK NSTYNNDNVN NVAVAGLIEE TVRSCLSPLF  180
KELLNTSMGG GLCGGRGFSG LALHPIPLSF GGPSINFGGG GEMADERWRK QQILELEVYS  240
KRLELVQEQI KTALEDLRSM GG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28040.13e-53GeBP family protein