PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022153443.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

FAR1

Protein Properties

Length: 1473aa MW: 169817 Da PI: 5.4153

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022153443.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	66	9.7e-21	60	142	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 fY+ YAke GF vr+s++ ++ +++e ++ ++ Cs g++++++ + r+r+etrtgC a++k +++++ +w+++++el+HnH ++ XP_022153443.1 60 FYSCYAKEQGFGVRVSNTWYR-KSKERYRGKLSCSSAGFKKRSEAN-----RPRPETRTGCPAMIKFRLMDTRRWRIIEVELDHNHLIN 142 9*************99997.66779**********99888.....*********************************775 PP
2	FAR1	69.4	8.6e-22	864	948	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 ++Yn YAke+GF +r+++s ++++++e + ++C++eg+++ ++ + ++r+etrtgC a++++++ ++++w+v++++leHnH++ XP_022153443.1 864 NYYNCYAKELGFAIRVKSSWTKRNSKEKRGAVLCCNCEGFKTVKEVN-----SRRKETRTGCLAMIRLRLVDSNRWRVDEVKLEHNHSFD 948 69**************************************99888.....8999*****************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 1473 aa Download sequence
MDGVSLNTEP VGDDDADYFE IEGDSVIAEY VDQAGIFQGE NPLPPAVGME FESYEDVYYF 60 YSCYAKEQGF GVRVSNTWYR KSKERYRGKL SCSSAGFKKR SEANRPRPET RTGCPAMIKF 120 RLMDTRRWRI IEVELDHNHL INPTGGKFYK SHRNLGVGTK RLLQLDSSEE GHKVRLFRTV 180 VIDADHNGYL DVDEGESGNS VDHSNKLKLN EGDAVAVEEF LCQAQLTDSN FFYVVDLNEK 240 GSLRNLFWVS SRSRAAYTYF GDVVSIDTSC LTNKYQVPLV SIVGINHHGQ SVLFGCGLLA 300 METVESYIWL FRAWLTSVLG RPPRVIIADQ CGAMQIALAD VLPRASHCIS LPDIMRKIPQ 360 KLGGLLEYEA IKAAIYRAVY HSQKQEQFEA AWEGMILQQG LGDHKWLQGL YEDRRRWVPV 420 FMKDIFLAGM LPIQSGDVVL SFFQEYLAVH TSLREFLEKY DQALQSHHQL EALADLDSKN 480 SSFMLKSRCY FELQLSKLYT NEILRKFEKE VEGMYACFSS RKLNAEGPLL TYVVEEHVEM 540 EGSRRDARDF EVLYNESEME IQCTCGLFNL KGYLCRHALS VLTQNGIEEI PPQYILPRWR 600 KDVKRNYVLD YCCTGIDINS QIHRYDHIYK SIVQVIEEGR KSKDRYDIAI QGINDILSKL 660 RLGTNPSNYL LVTNGTYFKI QDHIFSQDLG YGKRFPGILE KKVVESIVNH VCPFLCSLDT 720 HFGEGRAPTM TGDDSFSPND DAFSTNPSFD ISIEEGSQNS GELLEEEGNN LENECEQLFR 780 IDDNDLDDER DEKFLLDGHR NHRNDVNITD GNESFGDDIS INADHEHDRD ESPLIDCQID 840 LSGGKDYLPP VAGMEFESYD DAYNYYNCYA KELGFAIRVK SSWTKRNSKE KRGAVLCCNC 900 EGFKTVKEVN SRRKETRTGC LAMIRLRLVD SNRWRVDEVK LEHNHSFDPE RAQNSKSHKR 960 MDVGAKRKVE PSIDVEVRTI KLYRSSELDA MGYQGLNSNG ESKTHVNKPR CLPLKKGDTQ 1020 AIHDFFHRVQ LTDPNFFYVM DLYEEGLLRN VFWINSRCRA AYGYFNDVVA FDTMCLSSNF 1080 EIPLFAFVGI NHHGQSVLLG CGLLADETLE TYIWLLRAWL TCMSGRPPQT IISDQCKPLQ 1140 SAIAEVFPRA HHRLCLSYVM QSIFENVGEL QESEAFHVVL SRTIYDCVKV EEFEMAWEDM 1200 IQHFGIKNHE WLQSLYDDRE RWAPVFSKET FFAGMYNCEK GDWMIPFFHG YVHRQTSLKE 1260 FFDYYELVLQ KKQEIEALQD LESTEFSPVL KSRCLFELQL SKLYTKEIFS KFQDEAVMIS 1320 SCFSLPQIET SSGPVATFVV KEHETEETPG DGRSFEVMYD KAGGEIRCIC NCFNFKGYLC 1380 RHALFILRYN GVDEIPYQYI LSRWRKDFKR VYVPDLGCNN IDITNPVQWF DHLYRRAIQV 1440 VQEGMTSQDH YMVSWQALKE SLNKVRLIAD RHV

Sequence ? help Back to Top

Protein Sequence Length: 1473 aa Download sequence

MDGVSLNTEP VGDDDADYFE IEGDSVIAEY VDQAGIFQGE NPLPPAVGME FESYEDVYYF  60
YSCYAKEQGF GVRVSNTWYR KSKERYRGKL SCSSAGFKKR SEANRPRPET RTGCPAMIKF  120
RLMDTRRWRI IEVELDHNHL INPTGGKFYK SHRNLGVGTK RLLQLDSSEE GHKVRLFRTV  180
VIDADHNGYL DVDEGESGNS VDHSNKLKLN EGDAVAVEEF LCQAQLTDSN FFYVVDLNEK  240
GSLRNLFWVS SRSRAAYTYF GDVVSIDTSC LTNKYQVPLV SIVGINHHGQ SVLFGCGLLA  300
METVESYIWL FRAWLTSVLG RPPRVIIADQ CGAMQIALAD VLPRASHCIS LPDIMRKIPQ  360
KLGGLLEYEA IKAAIYRAVY HSQKQEQFEA AWEGMILQQG LGDHKWLQGL YEDRRRWVPV  420
FMKDIFLAGM LPIQSGDVVL SFFQEYLAVH TSLREFLEKY DQALQSHHQL EALADLDSKN  480
SSFMLKSRCY FELQLSKLYT NEILRKFEKE VEGMYACFSS RKLNAEGPLL TYVVEEHVEM  540
EGSRRDARDF EVLYNESEME IQCTCGLFNL KGYLCRHALS VLTQNGIEEI PPQYILPRWR  600
KDVKRNYVLD YCCTGIDINS QIHRYDHIYK SIVQVIEEGR KSKDRYDIAI QGINDILSKL  660
RLGTNPSNYL LVTNGTYFKI QDHIFSQDLG YGKRFPGILE KKVVESIVNH VCPFLCSLDT  720
HFGEGRAPTM TGDDSFSPND DAFSTNPSFD ISIEEGSQNS GELLEEEGNN LENECEQLFR  780
IDDNDLDDER DEKFLLDGHR NHRNDVNITD GNESFGDDIS INADHEHDRD ESPLIDCQID  840
LSGGKDYLPP VAGMEFESYD DAYNYYNCYA KELGFAIRVK SSWTKRNSKE KRGAVLCCNC  900
EGFKTVKEVN SRRKETRTGC LAMIRLRLVD SNRWRVDEVK LEHNHSFDPE RAQNSKSHKR  960
MDVGAKRKVE PSIDVEVRTI KLYRSSELDA MGYQGLNSNG ESKTHVNKPR CLPLKKGDTQ  1020
AIHDFFHRVQ LTDPNFFYVM DLYEEGLLRN VFWINSRCRA AYGYFNDVVA FDTMCLSSNF  1080
EIPLFAFVGI NHHGQSVLLG CGLLADETLE TYIWLLRAWL TCMSGRPPQT IISDQCKPLQ  1140
SAIAEVFPRA HHRLCLSYVM QSIFENVGEL QESEAFHVVL SRTIYDCVKV EEFEMAWEDM  1200
IQHFGIKNHE WLQSLYDDRE RWAPVFSKET FFAGMYNCEK GDWMIPFFHG YVHRQTSLKE  1260
FFDYYELVLQ KKQEIEALQD LESTEFSPVL KSRCLFELQL SKLYTKEIFS KFQDEAVMIS  1320
SCFSLPQIET SSGPVATFVV KEHETEETPG DGRSFEVMYD KAGGEIRCIC NCFNFKGYLC  1380
RHALFILRYN GVDEIPYQYI LSRWRKDFKR VYVPDLGCNN IDITNPVQWF DHLYRRAIQV  1440
VQEGMTSQDH YMVSWQALKE SLNKVRLIAD RHV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G80010.1	0.0	FAR1 family protein