PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022153408.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

WRKY

Protein Properties

Length: 317aa MW: 34682.9 Da PI: 8.5755

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022153408.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	94.2	9.3e-30	168	227	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dgy+WrKYGqK+ +++++pr+Y++C++a +Cpvkkkv+rs ed+++++ tYegeHnh+ XP_022153408.1 168 VKDGYQWRKYGQKVTRDNPCPRAYFKCSFApSCPVKKKVQRSVEDQSILVATYEGEHNHP 227 58*************************99**************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 317 aa Download sequence
MAAYTSWVDS VDTSLDLNLN PLRFSGDAPV GGSSSLFSHK EKNYLDLERK VSVKEETGAL 60 MEELKRVSAE NKKLTEMLTV VCENYNTLRG HLVEQMNKNG EKEISSSRKR KSESSNNNMV 120 VNGINGNSES SSSDEESYKK PKEETINKAA KTTRIQVKIG ASESNLVVKD GYQWRKYGQK 180 VTRDNPCPRA YFKCSFAPSC PVKKKVQRSV EDQSILVATY EGEHNHPHPS HMEATSGAAR 240 SLSITPAPPG SSAAPAISLD LAAKPNPSTD PKTSSNPRFD SPELQQFLVE QMASSLTKDP 300 NFTAALAAAI SGKIFPH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	107	112	SRKRKS
2	108	142	RKRKSESSNNNMVVNGINGNSESSSSDEESYKKPK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G80840.1	2e-77	WRKY family protein