PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022152950.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

E2F/DP

Protein Properties

Length: 463aa MW: 51408.3 Da PI: 4.5925

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022152950.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	87	1.4e-27	142	207	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 r+++sL+llt+kf++l++++e+gi++ln++a++L +v ++RRiYDi+NVLe+++liekk kn+i+wkg XP_022152950.1 142 RYDSSLGLLTKKFINLIKQAEDGILDLNKAADTL---EV--QKRRIYDITNVLEGIGLIEKKLKNRIQWKG 207 6899****************************...99..**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 463 aa Download sequence
MSGSRAPNSS GLPSDQIMHS LKRHLPFSSM KPPFASPGDY HRFASEPRLS DHEPDAIVVK 60 SPQLKRKSEV ADYEAESTDR AAGPRFTEVV SSPHQTPVSV KGGKGNKSRL TKCSRSGPQT 120 PMSNVVSGSP SANNLTPAGP CRYDSSLGLL TKKFINLIKQ AEDGILDLNK AADTLEVQKR 180 RIYDITNVLE GIGLIEKKLK NRIQWKGLDV SRPGDVDDNY AGLQAEVENL SMEERGLDEQ 240 IREMQERLRD LSEDDNNQRW LFVTEEDIKG LPCFQNETLI AIKAPHGTTL EVPDPDEAVD 300 YPQRRYRIVL RSTMGPIDVY LVSQFEEKFE EINGVEVPPS LPSSSGFNET PATTMITDDS 360 RGKEIETREQ DVHRMCCDLN ASQDFVGGIM KIVPSVVDSD ADYWLLSDAD VSITDIWRSE 420 PGVEWNELGT FHEDYSIANV STPQTQNPPN NTTDMPSINP TSS

Sequence ? help Back to Top

Protein Sequence Length: 463 aa Download sequence

MSGSRAPNSS GLPSDQIMHS LKRHLPFSSM KPPFASPGDY HRFASEPRLS DHEPDAIVVK  60
SPQLKRKSEV ADYEAESTDR AAGPRFTEVV SSPHQTPVSV KGGKGNKSRL TKCSRSGPQT  120
PMSNVVSGSP SANNLTPAGP CRYDSSLGLL TKKFINLIKQ AEDGILDLNK AADTLEVQKR  180
RIYDITNVLE GIGLIEKKLK NRIQWKGLDV SRPGDVDDNY AGLQAEVENL SMEERGLDEQ  240
IREMQERLRD LSEDDNNQRW LFVTEEDIKG LPCFQNETLI AIKAPHGTTL EVPDPDEAVD  300
YPQRRYRIVL RSTMGPIDVY LVSQFEEKFE EINGVEVPPS LPSSSGFNET PATTMITDDS  360
RGKEIETREQ DVHRMCCDLN ASQDFVGGIM KIVPSVVDSD ADYWLLSDAD VSITDIWRSE  420
PGVEWNELGT FHEDYSIANV STPQTQNPPN NTTDMPSINP TSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22220.2	1e-158	E2F/DP family protein